Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1474 ATGACTCTTACTCAATCCATTGCCATTATCTTTCTCTTGTTTGCTCTATACTGTGGTCTAGACCCATTCAAGCACAGTACCATAGCAAATTTCCCAGAATTTGAGGCCAAAAAGGTTGACATGCCTGATTGGTCTGAGGTTCCTAAAGACAAAGACGAACATAATTTGTTGCAAAAATCAGAGATAAGGTTTTTGAACCAAGTACAAGGACCTGAGAGCATTGTGTTTGACCCTCTTGGTCGTGGTCCTTATACTGGTGTTGCTGATGGTAGAATTTTGTTCTGGAATGGACTTTCTTGGGTTGACTTTGCTTACACTTCGCCCAACAGGTCACTATGTAATCCCATAGCAAATGCGACACCATTTAGTTATGTGAAGACTGAGCACATATGTGGAAGGCCTTTGGGACTCAGATTCGACAAGAAAACAGGTGAATTGTACATTGCAGATGCATATCTTGGGCTGTTGAAGGTGGGGCCCGAGGGAGGTTTAGCAACATCTCTTGCAACTGAGGCTGAAGGGGTGCCTCTAAGATTCACTAACGATGTCGATGTTGATTCGGAAGGAAATGTTTATTTTACGGAAAGCAGTTCTATTTATCAGAGGAGGAATTTCATGCAGCTGGTATTTTCCGGGGATGATAGTGGAAAGGTTTTGAAATACAACCCTGCAACAAAGGAAACCACTGTTCTAGTGAGGAATGTTCAATTCCCAAATGGCATTTCCTTAAGCAAAGATTGTTCCTTCTTTGTTTTTTGTGAAGGGTCTATCGGCAGATTACGTAAATATTGGTTAAAAGGAGAAAAGGATGGGACATCGGAGATCTTAGCTATCCTACCTGGAGCTCCCGACAATGTGAGGGTGAATGAAGATGGTGATTTTTGGGTGGCACTTCACTGTAGAAGATCTATGTTTGCATACTATACTGGTTTATATCCAAAGATAAGGAAATCTATACTTAAGCTTCCAATACCAACAAAGAATCAATATCTGTTTCAAATCGGAGGTAAGTTACATGGTGTGATTGTGAAGTATAGTCCTGAAGGTAAATTGCTGCAGATATTGGAGGATAGTGAGGGAAAAGTTGTTAGAGCAGTGAGTGAAGTAGAGGAGAAAGATGGTCAACTTTGGATTGGAAGTGTTCTTATGCCTTTTATTGCAGTTTATAAACTATAA 1176 0.4056 MTLTQSIAIIFLLFALYCGLDPFKHSTIANFPEFEAKKVDMPDWSEVPKDKDEHNLLQKSEIRFLNQVQGPESIVFDPLGRGPYTGVADGRILFWNGLSWVDFAYTSPNRSLCNPIANATPFSYVKTEHICGRPLGLRFDKKTGELYIADAYLGLLKVGPEGGLATSLATEAEGVPLRFTNDVDVDSEGNVYFTESSSIYQRRNFMQLVFSGDDSGKVLKYNPATKETTVLVRNVQFPNGISLSKDCSFFVFCEGSIGRLRKYWLKGEKDGTSEILAILPGAPDNVRVNEDGDFWVALHCRRSMFAYYTGLYPKIRKSILKLPIPTKNQYLFQIGGKLHGVIVKYSPEGKLLQILEDSEGKVVRAVSEVEEKDGQLWIGSVLMPFIAVYKL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1474 391 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 6 391 - -
Mtr4g1474 391 Gene3D - 54 391 IPR011042 -
Mtr4g1474 391 SUPERFAMILY Calcium-dependent phosphotriesterase 53 390 - -
Mtr4g1474 391 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Mtr4g1474 391 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 391 - -
Mtr4g1474 391 Pfam Strictosidine synthase 181 268 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1474 Mtr-Chr4 26135482 26138670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1474 - - gmx:100803331 666.381