Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1444 ATGGGTTACTCCAAACAATGTTATGTCTTGTTGTTGGTAGTGTTACTTGTTGCATGTGCAAATGGAGAAGATCCTTATAGGTTTTACAATTGGAATGTTACATATGGAGATATTTATCCACTTGGAGTTAAACAACAGGGGATTTTGATAAATGGACAATTTCCTGGGCCACAGATTGAGTCAGTGACTAATGATAATTTGATTATCAATGTTTTTAATAGCTTGGATGAACCTTTCCTCATTTCTTGGAATGGAGTGCTACAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACAAATTGTCCAATCTCTCCAGGACAGAACTTCACTTATATTCTTCAAGTAAAAGATCAGATTGGTAGCTATTTCTACTTTCCTTCCCTTGCATTTCACAAGGCAGCAGGTGGTTATGGCGGTTTCACAATCGCTAGTCGCTCCGTGATTCCCGTACCTTTCGATCCTCCATCCGGAGATTACACCATATTGGCAGGAGATTGGTACAAAAGAAATCACACAGATTTGAGAGCCATTTTAGATAGCGGAAGTGATCTTCCTTTCCCGGATGGACTTGTCATCAATGGTCGCGGTTCCAATGCTTACACATTCGCGGTTGATCAAGGCAAGACTTACAGATTCCGGATATCAAATGTGGGGATTACCACATCAATCAATTTCAGAATCCAAGGGCATAAGATAAAGCTTGTTGAGGTGGAAGGAAGTCACACTCTGCAAAACACTTATGACTCACTTGACATTCATTTGGGGCAGACGTATTCTGTATTGGTTACTGCTGATCAACCACCACATGACTACTACATTGTTGTCACAACAAGGTTCACGTCACAGGTGCTGAATGCTTCATCGATTCTTCATTATAGTAACTCGGCAGGAAGTGTTTCTGGTCCTCTTCCTGGTGGACCAACCACTGAAATCGATTGGTCCGTTGAACAAGCTCGGTCTCTAAGGAGGAATCTTACAGCAAGTGGACCAAGACCAAATCCACAAGGATCCTACCATTATGGAATGATAAACACAACACGTACAATTAGACTTCAAAATTCTGCTCCAATTATCAATGGAAAACAAAGATATGCTGTCAACGGTGTGTCATTTATTCCTGCTGATACACCACTCAAACTAGCTGATCACTTCAACATCCAAGGGGTGTTTTCACTTGGAAGTATCCCGGACAATCCCACCGGAGGTGGTGGTTATCTTCAGACTTCTGTCATGGCAGCCGATTTTCGAGGTTTTGTGGAGGTTGTGTTTGAGAATCCTGAAGACACTTTGCAATCATGGCACATTGATGGACATAGCTTCTTTGTAGTAGGGATGGATGGAGGACAATGGTCAGCTGCAAGCAGACTAAATTACAACTTAAGAGATACAATTGCTCGTAGTACAGTTCAGGTGTATCCAAAGTCATGGACTGCACTGTACATGCCATTGGATAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCAAGACAATATTTGGGCCACCAATTTTATCTTAGAGTGTATTCATCTACAAATTCATTGAGAGATGAGTACCCTATTCCAAGCAATGCACTTCAGTGTGGCAAGGCAGTGGGCCACCACAATTAG 1617 0.4218 MGYSKQCYVLLLVVLLVACANGEDPYRFYNWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPISPGQNFTYILQVKDQIGSYFYFPSLAFHKAAGGYGGFTIASRSVIPVPFDPPSGDYTILAGDWYKRNHTDLRAILDSGSDLPFPDGLVINGRGSNAYTFAVDQGKTYRFRISNVGITTSINFRIQGHKIKLVEVEGSHTLQNTYDSLDIHLGQTYSVLVTADQPPHDYYIVVTTRFTSQVLNASSILHYSNSAGSVSGPLPGGPTTEIDWSVEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPIINGKQRYAVNGVSFIPADTPLKLADHFNIQGVFSLGSIPDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSSTNSLRDEYPIPSNALQCGKAVGHHN* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1444 538 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Mtr4g1444 538 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 533 - -
Mtr4g1444 538 SUPERFAMILY Cupredoxins 155 333 IPR008972 -
Mtr4g1444 538 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Mtr4g1444 538 CDD CuRO_3_AAO_like_1 374 496 IPR034275 GO:0005507
Mtr4g1444 538 Gene3D - 157 331 IPR008972 -
Mtr4g1444 538 Pfam Multicopper oxidase 159 295 IPR001117 -
Mtr4g1444 538 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Mtr4g1444 538 Gene3D - 26 147 IPR008972 -
Mtr4g1444 538 Gene3D - 342 536 IPR008972 -
Mtr4g1444 538 PANTHER MULTI-COPPER OXIDASE 8 533 IPR045087 -
Mtr4g1444 538 SUPERFAMILY Cupredoxins 343 534 IPR008972 -
Mtr4g1444 538 Pfam Multicopper oxidase 377 513 IPR011706 GO:0005507|GO:0016491
Mtr4g1444 538 CDD CuRO_1_AAO_like_1 28 144 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1444 Mtr-Chr4 25707196 25711828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1444 - - qsu:111999220 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1444 4 25707196 25711828 Mtr4g1444 4 25707196 25711828 ECH