Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1430 ATGAACAATGAACACAAAACGCGCGTGGCATTCACGATCGTCACTTTAACTACTGCTGCAATAATCTTCTTCACTGTTCGCCGTATGCGGCGGAGGAAGCAACGTGAATCCCCTTCGAGTTCGTGCTACTCACATTCCGAACCCAAACCGCAGTCGGCTTTTAAGCGAGTTTTAGCTGATAACTCCTATGCTCCCTTCAAGCATTTGAGCTTCAATGCCTCCAAGAATAACGGAAATGGCTCTAGTTTGCATCCATTTCAAGCAGAGATTACGGCGTTGTTACAAAACCATCAACCTGAAATTGAACTTGGTGCTGAGAAGTTAGAAATGAATGATTCGTATGTTTGGGTTGATACTGAGATGCAGTTAAAGAAACTGGTTAATGTATTGAGCAAGGAAAAATTCTTTGGTGTGGACACAGAACAACATAGTTTGCGTTCTTTTCTAGGCTTTACAGGGTTAGTTCAGATTTCTACACAACAAGAAGATTATTTGATCGATACAATTGCTCTCCATGATTCTATGGAAATTCTCCGTCCAGTTTTTGCTGACCCTTCAATATGTAAAGTGTTCCATGGGGCCGACAATGATGTTCTCTGGCTACAGAGGGACTTCCACATATACGTTGTTAATCTATTCGATACTTCAAAGGCGTGTGAGGTGCTATCAAAACCACAAAAATCACTTGCTTATTTGCTAGAAACCTATTGTGGTGTCAATACAAATAAATTATTACAGCGTGAAGACTGGAGACAACGTCCTCTCTCAGCAGAAATGGTACATTATGCACGGACAGATGCACACTATCTGTTGTATATTGCAAATTGTCTGATCGATGAACTCAAACAACTGGACAATGAAAACTCTTGTTCCGATGACAAATTCCATTTTGTTCTCGAGGCTAGTCGACGTTCAAACATGATTTGTTTGCAACTTTTCACAAAGGAGATTGAAGCTTCGCCAGGAGAATCTGCTGCATTATCATTATATTCGCGTCATCAGAGCAATCGAGCCTCTCCTTCAATTTCCAATGAAACTCAGTTTCTGTCTATTGTGAGGCAGCTGTGCACATGGAGAGATTTGATGGCTCGTATTCATGACGAGAGCTTAAAGTATGTGTTGTCAGACCAGGCAATTGTTGCTTTGGCAAGTCGACTTCCAGCAAGTAACTCTGAAATATACAACTCCATAGTTCAGACTGATGTCAATGCAGAAACGGGTCTCAGCTCTTCTATCCCTTCTCCATCTCCTGTTGTTTGCAGCCACCTCACTGATATCTGTCATCTGCTTGCAAACAAGCTGGTTAACCATGGTGATATTTATTCTGTGATTCTTCAAAAGTGTCTAGGTCAAAATGGAAATTGTAAACTCAACATTTCTAATTATGCTTTGTTGGTTAACTGTAACGTAAGACCTACTTTATCCTCTAAACGCTCAAGCCTAAAAAATCCTAGACAACATTCTAAAAAGGCTTCTCGAAATTTGTTTGTTAAAAAATTCTCTTGCAAATCTCCTGTTTATCACAATTGCCGGATATTTGCTAACGACGGGAGGCTGCTTTGTTATTGTGATCGGAAGAAGCTTGAATGGTACCTTAGCCGGGATCTTGCAAAAGTTGTCGATGAGGAACCCCCAGCTATAATGCTTCTTTTCGAACCCAAAGGCCGGCCAGAGGACGAGGGCAATGATTTTTATATCCAAAGTAAAAAAAATATATGTGTTGGATGTGGTGAAGGAAATCACTATTTACGATATCGAATAATCCCATCATGCTACAGAATACATTTCCCTGAGCATTTGAAAAGCCACCGCTCTCATGATATTGTCCTACTTTGTGTGGATTGCCATGAAGCTGCCCATGCTGCTGCAGAGAAGTATAAGAGAAAAGTAGCTTCTGAATTTGGGATTCCTCTCTATGTTCGTAGGGTAATTCATCCGGGGCAGGAGACTGAAAAACCGAATGACGAGGGAGGTGTATCTCCGTTACAATTAAGATCAGCTGCTGTTGCTCTTCTACGTCACGGGCCAAGAATGCCTCATGATCGGCGTGAAGAACTGACTGAGATTATAAAGACATATTATGGAGGAAGGGAGATATCTAAGGAAGATCTAGAAAAAGCTTTGCAAGTTGGCATGACTCCTCACGAGAGAAGAAAGTTTGAGAAGAAGAGAGGAGTATCATCTAAACATTCGACTGGAAGTGCTTCTGCAGTGCCATATGAGGGGAATGATACTGATTATGCACCTGGAATGAGTAATGGGGACACATTGAAGGTTGATACTCTTGACGGTTCATACGTAAATGAAGAAACAAGAAGTGGAGATAATAGACAAGATGATTCGGGAAAGCCCTCTCTGGCTTCTGATCTTGCAGTTGATAAAGCTACTTCAAATGGAAATACCATCGTTGTTAAAACTACTGATCATGATGATGATGAAACAAGTTACTCGCTTGTAGATACTGATGAGAGTCTTAACAAAATGCAACCAAATGTTGTTAGCGACGAAGAATCAATCAAAGATGAAGATACAACACAAGCAAAACATCATTCAAAACTGTCACTTTTAGGACATGGTCCACATGGGAAACAAGTTGTAGATCATTTACTGAAGGAGTATGGTGAAGATGGCATTAGAGAGTTTTGTCAAAGATGGAGACAAGTATTTGTGGATGCTTTAAAACCGCGTTTTCTTCCCGGGGGATGGGATGTAAAACACAGCGGAAGAAGGGACTTTGGTGAGTTCAGCGTATACAATCATCAAAAAAGAGAGACTGCTGATAGTATGGAGTAA 2793 0.4089 MNNEHKTRVAFTIVTLTTAAIIFFTVRRMRRRKQRESPSSSCYSHSEPKPQSAFKRVLADNSYAPFKHLSFNASKNNGNGSSLHPFQAEITALLQNHQPEIELGAEKLEMNDSYVWVDTEMQLKKLVNVLSKEKFFGVDTEQHSLRSFLGFTGLVQISTQQEDYLIDTIALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVNTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLIDELKQLDNENSCSDDKFHFVLEASRRSNMICLQLFTKEIEASPGESAALSLYSRHQSNRASPSISNETQFLSIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDVNAETGLSSSIPSPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISNYALLVNCNVRPTLSSKRSSLKNPRQHSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKRKVASEFGIPLYVRRVIHPGQETEKPNDEGGVSPLQLRSAAVALLRHGPRMPHDRREELTEIIKTYYGGREISKEDLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAPGMSNGDTLKVDTLDGSYVNEETRSGDNRQDDSGKPSLASDLAVDKATSNGNTIVVKTTDHDDDETSYSLVDTDESLNKMQPNVVSDEESIKDEDTTQAKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKHSGRRDFGEFSVYNHQKRETADSME* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1430 930 MobiDBLite consensus disorder prediction 716 794 - -
Mtr4g1430 930 PANTHER PROTEIN RRP6-LIKE 3 1 924 - -
Mtr4g1430 930 Pfam HRDC domain 350 393 IPR002121 GO:0003676
Mtr4g1430 930 SUPERFAMILY Ribonuclease H-like 49 284 IPR012337 -
Mtr4g1430 930 SUPERFAMILY HRDC-like 345 397 IPR010997 GO:0000166|GO:0044237
Mtr4g1430 930 Pfam 3'-5' exonuclease 114 281 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mtr4g1430 930 ProSiteProfiles HRDC domain profile. 345 425 IPR002121 GO:0003676
Mtr4g1430 930 SMART 35exoneu6 114 282 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mtr4g1430 930 Gene3D HRDC domain 336 439 IPR044876 -
Mtr4g1430 930 Gene3D - 45 319 IPR036397 GO:0003676
Mtr4g1430 930 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 924 IPR045092 GO:0000175|GO:0000467
Mtr4g1430 930 CDD Rrp6p_like_exo 110 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1430 Mtr-Chr4 25309690 25318309 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1430 K12951 - gmx:100791485 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1430 4 25309690 25318309 Mtr4g1430 4 25309690 25318309 ECH