Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1419 ATGTCAGACTTTTGTCTAAAAAATGGTCACTCCTTCGCGCTGCGAAGGAGGCTTCACAGCCGCGTATCGTTGCTCCGGAGATGTATTCTTCGAGCTCTGCACCGACTGCTTGTCTGCTCAGGTAAGCAGCCCGGTGCTAATGCTACATACAGCATGTTAACTCCGCATTCAGCATTGCCATCTCCGCGGGCTTCGTTGTTGGATTCCACCGTCGAAACTGCTATCCAACCACCTGTTTTTAACACAAATGAATTGGATACTGATTTGGTTTCACTCAAAATTAGCTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGAATGAAAAAGAGCAGGGAGTGGAACAGAGGAAAGGACCAAATCAAATGGACAAAACATTGGTTGTGAGTGGAGCACGTATATCCTATTGTATCTGGGAAGTACAAGGGGATGGAAAATCAGAAGACCAGCTTCCAATGGCATGTAAGGACTCAGTGGCAATTTTGATCATGTTTGATCTTACAAGTCGATGCACATTAAACAGTGTTCTGGGATGGTATAAAGAAGCAAGGAAATGGAATCAGACGGCAATTCCGGTGTTGATAGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATATGCAATGGACCATCGCTAGTGAGGCAAGAACATATGCAAAGGCATTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAATGTCAACAAGATCTTCAAGTTTATCACTGCAAAACTCTTTGACTTACCTTGGACAGTGGAAAGGAATCTAAATGTTGGAGAACCCATCATTGATTTCTGA 831 0.4284 MSDFCLKNGHSFALRRRLHSRVSLLRRCILRALHRLLVCSGKQPGANATYSMLTPHSALPSPRASLLDSTVETAIQPPVFNTNELDTDLVSLKISLLGDCQIGKTSFLVKYVGNEKEQGVEQRKGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1419 276 PIRSF GTPase_Tem1 5 276 IPR017231 -
Mtr4g1419 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 269 IPR027417 -
Mtr4g1419 276 Pfam Ras family 93 256 IPR001806 GO:0003924|GO:0005525
Mtr4g1419 276 Gene3D - 82 267 IPR027417 -
Mtr4g1419 276 PRINTS Transforming protein P21 ras signature 92 113 - -
Mtr4g1419 276 PRINTS Transforming protein P21 ras signature 133 155 - -
Mtr4g1419 276 PRINTS Transforming protein P21 ras signature 194 207 - -
Mtr4g1419 276 PRINTS Transforming protein P21 ras signature 234 256 - -
Mtr4g1419 276 PANTHER MONOMERIC G-PROTEIN 52 275 - -
Mtr4g1419 276 ProSiteProfiles small GTPase Rab1 family profile. 86 276 - -
Mtr4g1419 276 SMART rho_sub_3 94 258 IPR001806 GO:0003924|GO:0005525
Mtr4g1419 276 PANTHER - 52 275 - -
Mtr4g1419 276 SMART rab_sub_5 92 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1419 Mtr-Chr4 25118315 25122255 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1419 K07976 - gmx:100780638 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1419 4 25118315 25122255 Mtr4g1419 4 25118315 25122255 ECH