Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1402 ATGGCTTCATCACTTTTTATGCCTTCATCCATAATGGAAGAAGAAGCCAGATTCGAGTCCGAAGTAGCCGAGGTGCAAGCATGGTGGAACACAGAGAGGTTCAGACTAACCCAAAGACCATACTCAGCAAAAGATGTAGTTTCCCTAAGAGGAAACCTGAGACAAACCTATGCCTCAAATGAGTTATCCAAAAAGCTCTGGAGACTTCTCAAAACCCACCAAGCCAACAGAACAGCATCGAGAACATTCGGTGCACTTGATCCGGTTCAAGTCACTCAAATGGCAAAACACTTGGACACAATTTACGTCTCAGGTTGGCAGTGTTCATCCACACACACAACCACCAATGAACCTGGTCCTGATCTTGCTGATTATCCTTACGACACTGTCCCGAACAAAGTTGAACATCTTTTCTTTGCTCAGCAGTATCATGACAGAAAGCAAAGAGAAGAGAGGATGAGTATGAGCCGAGAAGATCGAGCAAGAACGCCTTTTATTGATTATTTGAGACCGATAATAGCTGATGGCGACACTGGATTCGGTGGCACAACAGCTACTGTTAAGCTTTGTAAGCTTTTTGTCGAACGTGGTGCTGCTGGGATTCACATCGAGGATCAATCTTCTGTGACTAAGAAATGCGGTCACATGGCAGGGAAAGTTTTGGTTGCGGTTAGCGAACATATTAATAGGCTTGTTGCTGCAAGGCTTCAATTTGATGTCATGGGAGTTGAAACTGTTTTGGTTGCTAGAACTGATGCTGTTGCTGCTAATCTTATTCAATCGAACATTGATACAAGGGATCATCAGTTTATTTTGGGCGTGACGAATCCGAGTCTGAAGGGAAAGAGTTTGGCAACAGTTATGGCACAAGGATTTGCTTCTGGAAAGAGTGGAGCTGAACTTCAAGCATTGGAGGATCAGTGGTTGTCGAATGCGCAGTTGAAGACTTTCTCGGAAGCGGTTACAGATGCAATCAAGAGCCAAAATGTTAACGAAGATGAGAAAAGAAGGAAGTTGAACGAGTGGATGCATTTTTCGAGTTACGAGAAATGTCTTTCAATCGAGGAAGGTAGGGAGATTTCTGAAAGATTAGGTGTGAGAAACCTCTTTTGGGATTGGGACTTGCCTAGAACTAGAGAAGGGTTTTATAGGTTTAAAGGTTCTGTTACCGCGGCTATTGTTCGCGGTTGTGCTTTCGCACCACACGCTGATCTTATCTGGATGGAAACAGGAAGTCCTAATGTGGTTGAGTGCACACAGTTTTCTGAAGGGATGAGATCAAAGTATCCACAGATGTTGCTCGGATACAATCTTTCGCCATCTTTTAACTGGGATGCTTCTGGTATGAGTGATATCGAAATGAGGGATTTTATTCCTAAGATCGCTCAGTTAGGGTATGTGTGGCAGTTCATAACTGTTGGTGGTTTGCACTCTAATGCATTAATCACTTCAACATTTGCTAGGGATTTTGCTAACAGAGGAATGTTAGCTTATGTGGAAAGGATTCAAAGAGAGGAAAGGAACAATGGTGTCGATACACTTGCTCATCAGAAATGGGCCGGTGCGAATTACTATGACAGGTACCTCAAAACTATCCAGGGTGGTGTTGCGTCAACCGCTGCAATGGGAAAAGGTGTTACTGAAGATCAATTTAAGGAAACATGGACTAGGCCAGGAACAGTGGGCATTGATAGAGATAATGGCAGCATGGTGGTTGCTAAGGCCAGAATGTGA 1734 0.4377 MASSLFMPSSIMEEEARFESEVAEVQAWWNTERFRLTQRPYSAKDVVSLRGNLRQTYASNELSKKLWRLLKTHQANRTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSSTHTTTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMSMSREDRARTPFIDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDVMGVETVLVARTDAVAANLIQSNIDTRDHQFILGVTNPSLKGKSLATVMAQGFASGKSGAELQALEDQWLSNAQLKTFSEAVTDAIKSQNVNEDEKRRKLNEWMHFSSYEKCLSIEEGREISERLGVRNLFWDWDLPRTREGFYRFKGSVTAAIVRGCAFAPHADLIWMETGSPNVVECTQFSEGMRSKYPQMLLGYNLSPSFNWDASGMSDIEMRDFIPKIAQLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTIQGGVASTAAMGKGVTEDQFKETWTRPGTVGIDRDNGSMVVAKARM* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1402 577 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Mtr4g1402 577 Gene3D - 17 535 IPR040442 -
Mtr4g1402 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 11 535 IPR015813 GO:0003824
Mtr4g1402 577 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 554 IPR006254 GO:0004451|GO:0019752
Mtr4g1402 577 TIGRFAM isocit_lyase: isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Mtr4g1402 577 PIRSF ICL 12 329 IPR006254 GO:0004451|GO:0019752
Mtr4g1402 577 PIRSF ICL 368 554 IPR006254 GO:0004451|GO:0019752
Mtr4g1402 577 Gene3D - 262 377 - -
Mtr4g1402 577 CDD ICL_PEPM 66 257 IPR039556 GO:0003824
Mtr4g1402 577 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1402 K01637 - gmx:100782793 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1402 4 24754956 24758079 Mtr4g1402 4 24754956 24758079 ECH