Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1382 ATGGATGAAGGTTTATGTAATCTTGAAGTGGATGTAAATGGAGAAGAAACTTTCATGGTAGATAAGACGATTATTACTCAGTACTCAAGCAAATTGGCTAAAGTATTTGGAAAATCAAGTGGTGGAAGTGGAAAGCTTAAAGTAATATTTCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTCTGTTATAACAATGGAAAAGGTAATTTAAGTCCTTCGAATCTGTTACTCGCGCGTTATGCTGCTGAATACATGGAAATGAATGAATCTGTCAAAAATGTTTCTAACTTATTGGATCAAACTGAGAAATCTGTTCAAGGGATTAGTTATTGGTCATGGTCAGAAATTTTGATTACTTTGAAGCAATGCCAGAATTTGTTAGTTGATGATTCTTCTGTGATGCTAGAGAAGTGTTTGGATGCTGTAGTTGGGAGGCTGGTTTCGGCGAGTGAAGCAAGTCCGTGTCCATCAAGTTGTTCGAACGACAGTTCAGGGATTAGGTTTTCGTGTGACTCGAAAAGTACTGAGAGTATTAAGACGAATTTCACTCGTTCGACATGGTGGTTTGAAGATCTCTTGTTTTTGACTCCCCAGATGGTTATCATGTTGGTAAAGTCAATGCTTTCGAGTAAATTGGATCATTATGTTATAAGTAGGTTTCTTCTGTATTATCAGAAGGCGAAATTCGCCACTGCTACTACAGATGAGAAGTGCAAAATCATTGAAATGGTCATAGATATGCATTACGAAATAGACCGGAATTCTGTTTCTTTCAAAACATTATTTGGGATTCTTCGGGTGACTTTGTGCTTGAACATAAGTAAATGTAGTAGGAATAAGTTGGAGATTATGATTGGTTCACAATTGGATCAAGTAACATTGGACAATTTGCTTGTTCCATCTCCCTATGGAATAAACTACTTATATGATGTGAACCTTGTTCTGAGATTTTTGAAAGCGTTCCTGCGGCAAGGAACTGGTGCCGTTGCTCCCGTTCGGATGAGGAAAGTTGCTAGCTTAATAGATTTGTATATAGCTGAAATTGCACCTGATCCTTGTTTAAAAACTTCAAAGTTTTTGGCTCTTGCAACAGCTCTTCCAGATTCTGCTAGGGATTCTTGTGATGAGCTTTACCATGCAATGGACATGTATCTTGAGGTACATCCTCAACTGTCACAAGATGAAAGGATAAAGATATGCTGTGGTTTAAATTACGAGAAGCTTTCACCGCAAGCATGTCTACACCTTTCAAAGAACACGAAATTTCCATCGAAATCAGCAGTTCAAGCTCTCATATCTCAACAATCTAAGCTAAAAAATTTACTCCTTACTACTACTACTACTCCCATTTCAACTCCATACAATGATTCTTTGTGTGGTTCAAGTGGTTCATCTCAAAAGGGAAAGAAAGAAAAAAGCAATGAACAAGTTGTGTTGTATGCTGGAAATTTTGATATTCAACCTGATAATGAGAAAATGAAAGAACATTTGCAAGGAATGCAGTGGAGAGTTATGGAATTAGAGAAAGTATGTAAGAAAATGCAAACTCAGATGGCTAAGATGACAAAATCAAAAGCATCTGGTCATAGTTATGGTAAATCTTTGCCAAAGCTATGTTCATGA 1638 0.37 MDEGLCNLEVDVNGEETFMVDKTIITQYSSKLAKVFGKSSGGSGKLKVIFHDFPGGAEGFELMLRFCYNNGKGNLSPSNLLLARYAAEYMEMNESVKNVSNLLDQTEKSVQGISYWSWSEILITLKQCQNLLVDDSSVMLEKCLDAVVGRLVSASEASPCPSSCSNDSSGIRFSCDSKSTESIKTNFTRSTWWFEDLLFLTPQMVIMLVKSMLSSKLDHYVISRFLLYYQKAKFATATTDEKCKIIEMVIDMHYEIDRNSVSFKTLFGILRVTLCLNISKCSRNKLEIMIGSQLDQVTLDNLLVPSPYGINYLYDVNLVLRFLKAFLRQGTGAVAPVRMRKVASLIDLYIAEIAPDPCLKTSKFLALATALPDSARDSCDELYHAMDMYLEVHPQLSQDERIKICCGLNYEKLSPQACLHLSKNTKFPSKSAVQALISQQSKLKNLLLTTTTTPISTPYNDSLCGSSGSSQKGKKEKSNEQVVLYAGNFDIQPDNEKMKEHLQGMQWRVMELEKVCKKMQTQMAKMTKSKASGHSYGKSLPKLCS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1382 545 SUPERFAMILY POZ domain 4 103 IPR011333 -
Mtr4g1382 545 Gene3D Potassium Channel Kv1.1; Chain A 1 117 IPR011333 -
Mtr4g1382 545 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Mtr4g1382 545 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Mtr4g1382 545 MobiDBLite consensus disorder prediction 526 545 - -
Mtr4g1382 545 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 545 - -
Mtr4g1382 545 PANTHER OS12G0117600 PROTEIN 12 545 IPR043454 -
Mtr4g1382 545 SMART BTB_4 6 107 IPR000210 GO:0005515
Mtr4g1382 545 Coils Coil 509 529 - -
Mtr4g1382 545 Pfam NPH3 family 191 418 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1382 Mtr-Chr4 24369145 24373100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1382 18 525 EF-hand Containing Proteins AT3G44820 25.835 1.20e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1382 - - gmx:100784792 813.527