Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1358 ATGGCTACCAATGGTTTTGAAGACTTGTTACCAGTGATGGCAAACAAGCTAGGTGGTGAAGGTTTAATAAAGGAGCTATGCAATGGATTTGAATTGTTGATGGACAAAGAAAAAGGTGTGATAACATTGGATAGTTTGAGGCAAAACGCTGCTGTTTTGGGTTTACAAGATTTGAAGGAAGATGAACTTGTTGGTATGATGAATGAAGGTGATTTAGATAGAGATGGAGCACTTACTCAGATGGAGTTTTGTGTTTTGATGTTTAGGTTGAGTCCTGAATTGATGGAAGAGTCTTGGTTTTGGCTTGAGGAAGCTCTGCAACATGAACTTGGTTCCTTGTAG 342 0.3918 MATNGFEDLLPVMANKLGGEGLIKELCNGFELLMDKEKGVITLDSLRQNAAVLGLQDLKEDELVGMMNEGDLDRDGALTQMEFCVLMFRLSPELMEESWFWLEEALQHELGSL* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1358 113 PANTHER CALCIUM-BINDING PROTEIN KIC 5 111 IPR044205 GO:0005509
Mtr4g1358 113 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 5 111 - -
Mtr4g1358 113 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Mtr4g1358 113 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
Mtr4g1358 113 Gene3D - 4 112 - -
Mtr4g1358 113 SUPERFAMILY EF-hand 21 99 IPR011992 -
Mtr4g1358 113 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1358 Mtr-Chr4 23679440 23679967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1358 6 110 EF-hand Containing Proteins AT5G54490 66.981 3.44e-46 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1358 K24345 - gmx:100527206 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1358 4 23679440 23679967 Mtr4g1358 4 23679440 23679967 ECH