Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1351 ATGGAAGAAGGGTTAATATCAGTAGATCGTTGGGGAAAGGGTAGTGAAGCATACTTCTTAACACATCTTCATTCCGATCACACTAAAGGTCTCTCTTCTAAATGGTCACATGGCCCACTCTTCTGCTCTCCAATCACCGCCAGACTACTTCCCATCAAATTTCCCAATTTCAATCTCTCCCTTCTTCGCATTCTTCATACTGGCACTTCTCACACTCTCTCACTCCGTTCGCCTTCTTCTTCCGATCCCACCACCGTTGTTGTCACCGCTATCGACGCCTGTCACTGTCCCGGTTCGATTATGTTGCTTTTCCGCGGAGATTTTGGTTGTGTGCTTTATACTGGTGATTTTCGTTGGGAAGCTGGTTGTGAGAAGGCAAGGATTGCCAAAAATATGCTTGGTGTTGCTCTTAAGGAACATGATGGTGATGTTGATGTTGTTTATCTTGATAATACTTATGCTAATCCTACTTATGATTTTCCTACTCGTAGCGTTGCGGCTCAGCAGGCAATTGATATAATTTCGGCGCATCCTGACCATGATGTTGTTATTGGAATCAATAATTATGGGAAAGAGGATCTCTTGCTTCAGATTTCAAGTGCCCTTGATATAGATATATGGGTGTGGCCACAGCGATTGCAGACTATGCATCTTCTTGGTCTCCCTGATGTATTTACAACCGATACAAGTGCTACTAGAGTCAGAGCTGTTCCAATGTATTGCTTTAGCATGGATACATTGGATGAATTAAATTTATACCGCCCAGGAAAATGCCCAACTATAGGAATTTTGCCATCAGGTCTTCCATGGGTAAAGAAATCCCTTAAAAAGAACGAGTTTCTTTCTGGTTCTTTTTTGACATTGCGTTATAAGAGACGCAGATGTGACACAGATAGTACTCAGGTCCAGATGGATAAGCAAAATGCAAAAACAGGATCTCCCAAAATGTTGAACAAGTATGTATTTTCAGTTCCCTACTCTGATCATTCAAACTATGCAGAGCTGGAGGATTTTATTAAGCTTGTCAAGCCAAGCAGTCTGAAGGGTATTGTTTCTTCCTCTACATGCTATATTGAACCCATGTACTATTTTGGCCGACTTTGTACCGGTAACCAACCAGTACAGCAGTTGCATAACAGGTCTAAACTGATAGAAAGTTGTAATGTTGAAGAGGATGATGATGAGTTAGATAGAAAGATAAGCAAGGAAAGTTATAAAATGAATGACATTGGCAAAAGGGTAGTAACAATCAGCTCTGAAACTTCATTTGAAGATGATTATGTTGAGTCAGACGATGAAACTTCATTTGAACATGATAAGTCTGTGTTAGATGAAACTTCATGTGAAGATTGGAATGTTGAGTTAGATGAAACTTCATTTGAAGCTGATAATGTTGAGTTAGATAGTAACAGAAGCAAGAACATGTTTGAAATGAAAGAAAATGGTAAAAGAGTAGTAAATGTCAGCCCCGAAACTTCGGTTAGAGATGATAGCGTTGAGCAAGGGAGGAACAGAATGAAGGCTTTGAAGGTTAAGTTATTAGGTTTTCGTATGAGAAGGTTAAGAAAACAGCGCAGAGCTAAAATTTCATACCATGTTAAAGAAGAAATTTGGTTTTCAGATTAA 1626 0.3961 MEEGLISVDRWGKGSEAYFLTHLHSDHTKGLSSKWSHGPLFCSPITARLLPIKFPNFNLSLLRILHTGTSHTLSLRSPSSSDPTTVVVTAIDACHCPGSIMLLFRGDFGCVLYTGDFRWEAGCEKARIAKNMLGVALKEHDGDVDVVYLDNTYANPTYDFPTRSVAAQQAIDIISAHPDHDVVIGINNYGKEDLLLQISSALDIDIWVWPQRLQTMHLLGLPDVFTTDTSATRVRAVPMYCFSMDTLDELNLYRPGKCPTIGILPSGLPWVKKSLKKNEFLSGSFLTLRYKRRRCDTDSTQVQMDKQNAKTGSPKMLNKYVFSVPYSDHSNYAELEDFIKLVKPSSLKGIVSSSTCYIEPMYYFGRLCTGNQPVQQLHNRSKLIESCNVEEDDDELDRKISKESYKMNDIGKRVVTISSETSFEDDYVESDDETSFEHDKSVLDETSCEDWNVELDETSFEADNVELDSNRSKNMFEMKENGKRVVNVSPETSVRDDSVEQGRNRMKALKVKLLGFRMRRLRKQRRAKISYHVKEEIWFSD* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1351 541 Gene3D - 6 349 IPR036866 -
Mtr4g1351 541 Gene3D - 159 329 - -
Mtr4g1351 541 Pfam DNA repair metallo-beta-lactamase 223 346 IPR011084 -
Mtr4g1351 541 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 458 - -
Mtr4g1351 541 PANTHER PROTEIN ARTEMIS 5 458 - -
Mtr4g1351 541 SUPERFAMILY Metallo-hydrolase/oxidoreductase 15 345 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1351 Mtr-Chr4 23542567 23545761 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1351 K15341 - gmx:100775842 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1351 4 23542567 23545761 Mtr4g1351 4 23542567 23545761 ECH