Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1316 ATGAGTTGGTCTTCCTTTTATAACACAGCCTCTAGGGTTTTCCATGAGTATCCATCCTGGTCTAAGTCTGTTGTTGTATGCACTATAATCAGCGGTGGAGGTTTAGCTGCATATAGTGATAGTGGTGATCAAAGACCAAGAAAGAAAGTGGTAGTGCTTGGAACTGGTTGGGCTGGAACTAGTTTTGTGAAAAGCATGAAAAACTCATCTTATGATATTCATGTTGTTTCACCACGTAATTATTTTGCATTCACTCCTTTGTTACCAAGTGTTACTTGTGGCACTGTGGAGGCACGAAGCATCATTGAACCTATTCGAAAAATCAGCAGAAAGAGTGGTTTAGATGTTCAATTCAGTGAAGCTGAATGCTATAAGATTGATTCAAAGAACAACAAAGTTTACTGCAGATCTAGTCAAGACAAAAAGCTCGGTGGCGTAGAAGAATTTTCCATTGATTATGATTACTTAGTAATAGCTATGGGCGCTCGTTCTAATACTTTTAACACACCTGGTGTTGAGGAGCATGCCTACTTCTTGAAGGAAGTGGAAGATGCTATGAGAATCCGCACAAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTCCCTTCTGTACCAATGGAAGAGAAGAAAAAACTTCTTAGTTTCGTAATTGTTGGTGGTGGTCCAACTGGAGTAGAGTTTGCTGCAGAGCTACATGATTTTGTGCATGAAGATCTCTCTAAATTATATCCTTCTCTTATAGACCATGTCAAGATTACTCTCCTTGAGGCTGGCGATCATATCTTAAACATGTTTGACAAGAGAATAACAGAATTTGCTGAAGAAAAGTTCAAAAGAGATGGAATTGATGTGAAATTGGGATCAATGGTTGTCAAAGTTGGTGAAAAAGATATCTCATCCAAAGAAAGAGAAAGTGGTCAGGTTGTTACTATGCCTCATGGGATGGTAGTTTGGTCAACTGGTATTGGTGCTCGTCCTGAAATACTCGATTTTATGAAACAACTTGGCCAGATTAATCGGCGTGCATTGGTGACCGATGAATGGCTAAGGGTGGAAGGGTGTGACAACATCTATGCTCTAGGTGATTGTGCGACTATAAATCAGCGTAGAATTATGGAAGATATAGCTGTGATATTTAACAAGGCAGACAAGGACAGTTCCGGAATGTTAGATCTTAAAGAATTTCAAAACGTTGTCGGTGACATTATTGAGAGGTATCCACAAGTAGACATTTATTTAAAGAAGAATCAAATGAAAGAGATGGCCACTTTGCTAAGTAAATCTCAGGAAAGCCCTACTACAGAAGTGGACATTGAATACTTCAAACAAGCTCTTTCGAAAGTTGATTCTCAGATGAAAAATCTACCTGCAACTGCTCAGGTAGCTGCTCAACAAGGAGCCTATCTTGCAGACTGTTTCAACCGCATGGAATTGTGCGAGAAATATCCAGAAGGCCCTCTAAGGTTTAGGGGAACAGGACGCCATCAGTTTCATGCCTTCAGGTACTCGCATTTTGGACAATTTGCTCCTCTCGGGGCAGAACAAACAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATTGGACACAGCAGTCAGTGGTTGTGGTATTCGGTATATGTAAGCAAACTAGTCAGCTGGAGAACAAGAGCTTTGGTGGTATCTGATTGGGGAAGGCGATTCGTATTTGGCAGAGACTCGAGTCAATTATGA 1710 0.4076 MSWSSFYNTASRVFHEYPSWSKSVVVCTIISGGGLAAYSDSGDQRPRKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIIEPIRKISRKSGLDVQFSEAECYKIDSKNNKVYCRSSQDKKLGGVEEFSIDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAMRIRTKVINLFERASLPSVPMEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLIDHVKITLLEAGDHILNMFDKRITEFAEEKFKRDGIDVKLGSMVVKVGEKDISSKERESGQVVTMPHGMVVWSTGIGARPEILDFMKQLGQINRRALVTDEWLRVEGCDNIYALGDCATINQRRIMEDIAVIFNKADKDSSGMLDLKEFQNVVGDIIERYPQVDIYLKKNQMKEMATLLSKSQESPTTEVDIEYFKQALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCEKYPEGPLRFRGTGRHQFHAFRYSHFGQFAPLGAEQTAAQLPGDWVSIGHSSQWLWYSVYVSKLVSWRTRALVVSDWGRRFVFGRDSSQL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1316 569 SUPERFAMILY FAD/NAD(P)-binding domain 205 367 IPR036188 -
Mtr4g1316 569 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Mtr4g1316 569 PANTHER NADH DEHYDROGENASE 66 569 IPR045024 GO:0003954|GO:0006116
Mtr4g1316 569 SUPERFAMILY EF-hand 364 455 IPR011992 -
Mtr4g1316 569 Pfam Pyridine nucleotide-disulphide oxidoreductase 48 372 IPR023753 GO:0016491
Mtr4g1316 569 Gene3D - 40 422 - -
Mtr4g1316 569 Gene3D - 435 568 - -
Mtr4g1316 569 PANTHER NAD(P)H DEHYDROGENASE B2 66 569 - -
Mtr4g1316 569 PRINTS FAD-dependent pyridine nucleotide reductase signature 50 69 - -
Mtr4g1316 569 PRINTS FAD-dependent pyridine nucleotide reductase signature 153 171 - -
Mtr4g1316 569 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 232 - -
Mtr4g1316 569 PRINTS FAD-dependent pyridine nucleotide reductase signature 342 364 - -
Mtr4g1316 569 SUPERFAMILY FAD/NAD(P)-binding domain 48 266 IPR036188 -
Mtr4g1316 569 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1316 Mtr-Chr4 22332890 22336744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1316 1 569 EF-hand Containing Proteins AT2G20800 66.496 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1316 K03885 - gmx:100820044 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1316 4 22332890 22336744 Mtr4g1316 4 22332890 22336744 ECH