Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1307 ATGAGGAAATATGTTGGTTCTCATTCAGGAAGGATGTTTAGTGACAAGAAATGGATTATCCCATTTTTCGCAAGTTTGTTGGTATCTGTGAGCTTGCTTCTGACAGCGATTCTTGGCGAATTTAGTTCTGCCGGTGGGGGAGAGGAGTTGCCGCTGGTTGACGTCATTTCGTTTAAGGGAGACGATTCCAGAGGTTTATTTGTGGAGTCGGATTTGGAAAGGTCTATTAATGCAAGTGTGGTTGTGAAAATGAAGGCGCCTAAGTTTGCGTATCTTATTTCGGGCACAAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTTTATCACCCGAGAAATCAGTATGTTTTGCATTTAGATCTTGAGGCGCCGCCTCGGGAGAGGTTGGAATTGGCAAATGCGGTGAAAGCTGATCCGGTGTTCAGGGAAGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTTACTTATAAGGGTCCTACAATGATCGCGTGCACTCTTCAAGCGATTGCTATACTGTTGAAGGAGAGTTCTGAGTGGGACTGGTTTATAAACCTCAGTGCCTCCGATTATCCTCTTGTGACACAGGATGATATGCTTCATGTTTTCTCTAATCTGTCAAGAGATCTTAATTTCATCGAACATACACGCCTATCCGGTTGGAAATTGAACCAAAGAGCAAGGCCCATTATTATTGATCCCGCCTTTTACTTATCAAAGAAATCTGATTTAGCAGTGACTAGTCAAAAAAGAACACTTCCTACGGCTTTCAAATTGTTCACCGGTTCAGCTTGGGTTGTACTAACACGGTCTTTTGTGGAGTACTGCATATGGGGATGGGATAACTTTCCACGGACTATGCTTATGTATTATACAAATTTTGTCTCTTCGCCAGAGGGATATTTTCACACTGTCATTTGCAACACTCAGAAATTTCGGCACACAGCAATAAGCCACGATCTTCATTACATTGCTTGGGACAGTCCACCAAAGCAACATCCCATGTCTCTAACTATGAAGAACTTCGACAAAATGGCCAAGAGCAATGCTCCCTTTGCCCGAAAATTTGCAAGGGATGATCCAGTCCTAGACAAGATTGACAAAGAACTTTTGGGGCGCACACATAGGTTTTCGCCAGGTGCATGGTGTATTGGGTCATCAGATGGTGGAGCAGACCCGTGCTCTTTGCGTGGCAATGATACAGTGTTTAGGCCAGGACCTGGTGCTGACAAGCTACATGAGCTGCTTCAGGTGCTGTTATCTGATGAATTTCGAAGCAAACAGTGTTTGTGA 1302 0.4401 MRKYVGSHSGRMFSDKKWIIPFFASLLVSVSLLLTAILGEFSSAGGGEELPLVDVISFKGDDSRGLFVESDLERSINASVVVKMKAPKFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELANAVKADPVFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDMLHVFSNLSRDLNFIEHTRLSGWKLNQRARPIIIDPAFYLSKKSDLAVTSQKRTLPTAFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTQKFRHTAISHDLHYIAWDSPPKQHPMSLTMKNFDKMAKSNAPFARKFARDDPVLDKIDKELLGRTHRFSPGAWCIGSSDGGADPCSLRGNDTVFRPGPGADKLHELLQVLLSDEFRSKQCL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1307 433 PANTHER BNACNNG43180D PROTEIN 5 427 - -
Mtr4g1307 433 PANTHER GLYCOSYLTRANSFERASE 5 427 IPR044610 GO:0015020
Mtr4g1307 433 Pfam Core-2/I-Branching enzyme 89 348 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1307 Mtr-Chr4 22241261 22246539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1307 76 432 Glycosyltransferase AT1G03520 75.350 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1307 - - gmx:100795146 758.829