Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1305 ATGGAAACCCAAAACAATAACGGGTCGGAACCTGGCCCGAACCTTGTTACGGCGGTGACACCGGAACTAATGCCTCAAAATCTCGTTAACAACAACCCTGTTGCGGCAGAGACACCTAAACCACAGCCTGAAAAGCTTATCAACAACAACGGGTCAGAACTTGACCCAAACCCTTTTGCGGCGGAGACACCGGTGGCCGGAAAGCTTGGTACTTCGGATGATGAAATTCCTATTGAGAAATCCGTGGAAAGGATCACGTTAACGGGTGACCCTCCTTCAGTTGAGGTGAATGGGAATGAGGATAAAGATGATGGAAGTGAAGGTGAAAGTGAAAGTGAAAGTTCTGAGTCTGAATCTGAGAGTTCTACTTCTTCATCGTCGACGTCTGGTTCTGACAGTGATGAAGACGACGAAGACGATGCAGAAGATGAAGAAGAAGGGCAGATAAGTGATGATGAGAAGATGGTTAGTTGGAGTGCGGCTGATGGTGATCTTGATGATGATGAAGATGTTGTAGTAGGACCAATTAAGTCAAAGAATGAGATTCAGAATTTGCCTCCAGTTCCTCCCGTGGATGTGTGTTTAGCACCACACCATAAAATGCTACCTGTGGGAGTTGTTATGTCGACTCTCGGAGCTCAAGTCATTGTGGAAGGAGTGGAGAAGCATGAACCTCTTAATGAGGGTTCTGTTCTGTGGCTGACTGAAAGCCGCAAACCACTAGGTTTAGTTGATGAAATCTTTGGACCAGTCAAAAACCCGTATTATGTTGTGAGATATAATTCTGAAAATGATGTCCCGGCGGGGATCCAAGGGGGAACAACTTTGGTCTCATGTGTTCCAGAATTTGCTGAACATGTGCTCAATAATAAGGATCTTTACAGGAAAGGCTATGATGCATCTGGTGCGTATGATGAAGAGTTGTTTGATGAAGTAGAGTTTTCAGATGATGAGAAAGAGGCCGAATACAGGAAAATGCAAAAAATGACAAAGAGAGGGGTAAATGATCAAAATCCTGGCAAGAAGAAAAACAATAAAAAGAAATTTTCACCGAAAGAGCATGTGTTACCTCCTAATGCACCTGTAGCATCACCGCATGTGTTTCCCAACGTCCCTAACGCACCTGCAGCAGCACCATTTGTTAATAAAGGAAACTATTCTCCTTTTTCAGGGATTGGACAAGGTGGAACTACCACAGTTTCTCCATTTCAACCTTTAAATGCAGGTCCTAACTTTGCTGCAAATTCAATGTGGGCAAATCAGACAACATTTCCACAGCAGCCACAGCCCTCCCTGCCTCCAAATGCATTTCCTTCAAATGCCATGTCATATTATCCACAAAACACACAATTTTCTCATCAGTTTCCTGTTCCAGGAATTCCATTTCAACAGCAAATGAATCCCAGTCACGGAACTCATTTCCCAACTATGATGCCTGGGGTACAGCCCAATATATTTTCACAACAACCCATGTATGCACCAGGGTTCTTGGGTCAAAACCAAATGCCACAACAATCCTTCCAACAGATTCAGCAACCACCTATATTTCAAGCGCAGCAACAGGGTTTTCCACCCACTGAATTGCAGCAGCGTCCTAGTCCTATTTCTGGCAACCCCTCTCAATTTCATCCAGGTTCATCAGGTAGTCGAGGGAGACCATCATTTCGTGGTGCCAGTGGGAGAGGGTGGCGACCTTCAAGGTGA 1704 0.4484 METQNNNGSEPGPNLVTAVTPELMPQNLVNNNPVAAETPKPQPEKLINNNGSELDPNPFAAETPVAGKLGTSDDEIPIEKSVERITLTGDPPSVEVNGNEDKDDGSEGESESESSESESESSTSSSSTSGSDSDEDDEDDAEDEEEGQISDDEKMVSWSAADGDLDDDEDVVVGPIKSKNEIQNLPPVPPVDVCLAPHHKMLPVGVVMSTLGAQVIVEGVEKHEPLNEGSVLWLTESRKPLGLVDEIFGPVKNPYYVVRYNSENDVPAGIQGGTTLVSCVPEFAEHVLNNKDLYRKGYDASGAYDEELFDEVEFSDDEKEAEYRKMQKMTKRGVNDQNPGKKKNNKKKFSPKEHVLPPNAPVASPHVFPNVPNAPAAAPFVNKGNYSPFSGIGQGGTTTVSPFQPLNAGPNFAANSMWANQTTFPQQPQPSLPPNAFPSNAMSYYPQNTQFSHQFPVPGIPFQQQMNPSHGTHFPTMMPGVQPNIFSQQPMYAPGFLGQNQMPQQSFQQIQQPPIFQAQQQGFPPTELQQRPSPISGNPSQFHPGSSGSRGRPSFRGASGRGWRPSR* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1305 567 MobiDBLite consensus disorder prediction 489 567 - -
Mtr4g1305 567 MobiDBLite consensus disorder prediction 131 150 - -
Mtr4g1305 567 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 40 550 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Mtr4g1305 567 MobiDBLite consensus disorder prediction 318 343 - -
Mtr4g1305 567 MobiDBLite consensus disorder prediction 315 364 - -
Mtr4g1305 567 Gene3D Probable tRNA pseudouridine synthase domain 173 277 IPR038664 -
Mtr4g1305 567 SUPERFAMILY Translation proteins 201 264 IPR009000 -
Mtr4g1305 567 MobiDBLite consensus disorder prediction 25 156 - -
Mtr4g1305 567 MobiDBLite consensus disorder prediction 489 548 - -
Mtr4g1305 567 MobiDBLite consensus disorder prediction 25 56 - -
Mtr4g1305 567 Pfam Gar1/Naf1 RNA binding region 202 268 IPR007504 GO:0001522|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1305 Mtr-Chr4 22216692 22220753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1305 K14763 - gmx:102660668 512.686