Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1296 ATGGAACCAACACTTCTCAACAACAACAACAATGGTTGTGGAAACTCTGAATATGAAAACATTATTAGTTGGTTCGAAGATGTGTCTAGGAACACAGGTTCTGTTCAAACTCAGATACTATGCAATATTCTGAAACAAAACCATGGTGTGGAATATCTCAAGAAATGGTTAGGGAATTACAATATATTCGAAATGGAACCATGTGCATTGGAATCTCTTTTCACTTCTTTGGTTCCTATTGCTTCACATGCTGATTTTGAACCATTCATTCAGAGAATTTCCGATGGTGACACTGCTCCTTTACTCACTCAACAACCTATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGGAGGCAGAAATTCGTACCCTTTACCCGACATAGTGCTCAAACCACGCTTCAAATATTCACTTTATCAGCAGCATATAGATCAAGAGTTTATCCAATAAGGGAAGGAGGAAGGGTTCTTGAATTCATATACGGCAGCAACTGTTTCAAAACAAAAGGAAATTTAACGGTGGGAACAGCAACAACACATTGTTATGCAAGTGAAGAATTCAAAATCAAAAAGCAAAAAACAAAGTCATTTAGTTGCAGCCCACAAGAAGTGATTTTCAGTGGAGACTATAAACAATCCACATATTGTCACCTCCTTCTTGGTCTCTTCTACTCCGATCAAGTCGAATTCATTACCTCAGCTTTTGTCTATAGCATGGTACAAGCTTTCACCACCTTTGAAGAACATTGGAGAGAAATTTGTAATGACATTAGACATGGAACTTTAAGTTCAAAAATTAAGTCACCAAAATTGAGAGAAGCTATTTTGGACATAATAAGTCCAAACACAAATTTAGCTACAAAATTACAAGGCTATTGTGAGGAGCTAGAAAAAGTTGATTGGTTTGGTTTGATTCCAAAGATTTGGCCAAATGTTAAGTACTTGTATGCAATAATGACAGGGTCAATGCAACCTTATTTGAAAAAACTTAGACATTATGCAAATGGGTTGCCTTTGATTAGTGCTGATTATGGTTCAACTGAAAGCTGGATTGGTGTTAATGTTAATCCTAGTTTGCCACCAGAAGAAGTTACATTTGCTGTTGTACCCACATTCTCTTACTTTGAATTCATACCTCTTCATAGAAATAAACAAGATAGCATTAGCAGTGATGATTTCATTGAAGACAAGCCAATTCCATTGTCCAAGATTATAGTAGGACAACAGTACGAAATTGTCCTCACAACTTTTACAGGGTTGTACAGGTGCAGACTAGGAGATGTGGTAGAAGTGTCAGGATTTCACAATGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAGCTAATTCTAACAGTAAACATAGACAAAAATACAGAGAAGGACCTCCAACTAGTGGTAGAGAGAGGATCACAGATTTTAAATAAAGCAAGAGCCGAAATTGTTGATTTTACCAGCAATGCAGATGTAACTAATGAACCTGGTCACTACGTTATTTACTGGGAGATTAAAGGAGAGGTAGATGACAATGTACTTGATGATTGTTGCAGAGAAATGGACCTATCTTTTGCTGATCATGGATATGTAGTGTCAAGAAAAACAAATTCAATTGGGCCACTTGAACTTTGCATTTTGGAGAGAGGGACTTTCAAGAAGATTTTGGATAATTTCATAGCCAATGGGGTTGCATTGAACCAATTTAAGACTCCTAGGTGCACTAACAATCATGTGTTACTCAAAATTCTTGACACTTATACCATAAAAAGGTTTCGTAGCACAGGATATAGTTTAAATTAG 1800 0.3672 MEPTLLNNNNNGCGNSEYENIISWFEDVSRNTGSVQTQILCNILKQNHGVEYLKKWLGNYNIFEMEPCALESLFTSLVPIASHADFEPFIQRISDGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLSAAYRSRVYPIREGGRVLEFIYGSNCFKTKGNLTVGTATTHCYASEEFKIKKQKTKSFSCSPQEVIFSGDYKQSTYCHLLLGLFYSDQVEFITSAFVYSMVQAFTTFEEHWREICNDIRHGTLSSKIKSPKLREAILDIISPNTNLATKLQGYCEELEKVDWFGLIPKIWPNVKYLYAIMTGSMQPYLKKLRHYANGLPLISADYGSTESWIGVNVNPSLPPEEVTFAVVPTFSYFEFIPLHRNKQDSISSDDFIEDKPIPLSKIIVGQQYEIVLTTFTGLYRCRLGDVVEVSGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQILNKARAEIVDFTSNADVTNEPGHYVIYWEIKGEVDDNVLDDCCREMDLSFADHGYVVSRKTNSIGPLELCILERGTFKKILDNFIANGVALNQFKTPRCTNNHVLLKILDTYTIKRFRSTGYSLN* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1296 599 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 16 596 - -
Mtr4g1296 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 16 596 IPR004993 -
Mtr4g1296 599 Pfam GH3 auxin-responsive promoter 24 576 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1296 Mtr-Chr4 22029473 22040003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1296 25 594 EF-hand Containing Proteins AT1G23160 33.675 8.45e-113 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1296 K14487 - gmx:100792358 1005.36