Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1277 ATGAGACTGAGGAAGCACAAACGGTGTTTTCCTTCTTGCTCATCTCTTCATAAAGTTGATGAGGATGAGATTTATTGGAGACACAGGAAGGAAGATGAAGAGTTGGAATGGTCACATGATTCCACTCGCTTAATAGCTCAGTTGACTCAATGTTTTTCTACTGCTATGGTTGGATCACGATCATGGATAGGAGGATTCTTTCACCGAACAAACACTAAACAAAATGATAAGTTTGTTGACTATCCTTTGACTCCTCTTGAGGAAGAAAGACTTCAACGGCTTCAAGAGCGGCTGGATGTTCCTTACGATGAAACTAGCCTTGACCATCAAGAATCATTGAGAGCTTTGTGGAATTGTGCCTTTCCTAATGTTACTCTAAAAGGTTTGATATCTGAACAATGGAAAGATATGGGATGGCAAGGTGCTAATCCATCCACCGACTTTAGGGGATGTGGCATCATTTCCCTTGAAAATCTGCTGTTTTTTGCAAGGAAATATCCGGCATCTTTTCACAGGCTGTTGTTGAAGAAAGATGGAGACCGAGCAACGTGGGAATATCCATTTGCTGCTGCTGGCATTAATATATCTTTTATGTTGATACAGATGTTAGATTTATGCTCAGAAGGAAAGCCTCGATGTCTTCCTGGCATGAATTTTGTCAAGTTATTAGGCGAAGATGAAGACGCGTTTGATGATTTATACTGTATAGCTTTTGAAATGGTGGATGCACAATGGCTGGCTATGCATGCTTCGTACATGAATTTTAACGAGGTTCTACAAGCAACACGGAAGCAATTGGAGAGAGAGTTATCCTTAGAAGACATCAACAAAATACAAGACTTGCCGGCTTACAATCTATTGTACCAATAG 870 0.4046 MRLRKHKRCFPSCSSLHKVDEDEIYWRHRKEDEELEWSHDSTRLIAQLTQCFSTAMVGSRSWIGGFFHRTNTKQNDKFVDYPLTPLEEERLQRLQERLDVPYDETSLDHQESLRALWNCAFPNVTLKGLISEQWKDMGWQGANPSTDFRGCGIISLENLLFFARKYPASFHRLLLKKDGDRATWEYPFAAAGINISFMLIQMLDLCSEGKPRCLPGMNFVKLLGEDEDAFDDLYCIAFEMVDAQWLAMHASYMNFNEVLQATRKQLERELSLEDINKIQDLPAYNLLYQ* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1277 289 Coils Coil 256 276 - -
Mtr4g1277 289 Pfam ELMO/CED-12 family 93 259 IPR006816 -
Mtr4g1277 289 PANTHER ENGULFMENT AND CELL MOTILITY 52 288 - -
Mtr4g1277 289 PANTHER BNAC05G01970D PROTEIN 52 288 - -
Mtr4g1277 289 ProSiteProfiles ELMO domain profile. 108 270 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1277 Mtr-Chr4 21437930 21443105 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1277 K23538 - gmx:100811853 517.694