Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1232 ATGGCCAAGACTGGTAGAATCTGCCACCTATTGCTAAGATTCTTGGCCTTCTCGGCCACCTTGTCTGCAGTAGTTGTCATGGTTTCTAGCCATGAAAAAGCTAGCTTTTTCACTGTTTCCTTTGAAGCAAAATATACCAACTCTCCTGCCTTCAAGTACTTTGTGATTGCAAACTCTATTGTAACTGTCTATGGATTTTTCGTCCTCTTTCTTCCAGCAGAAAGCTTGCTCTGGCGACTTGTGGTCGCCATGGATATGGTGTTGACAATGTTACTTATCTCAAGCATCTCTGCAGCTTTGGCTATAGCTCAAGTGGCAAAGAATGGAAACAATTATGCTGCTTGGCTACCGATTTGTGGTTCAGTTCCCAAATTTTGCAATCACATGACAGGAGCTTTAGTCGCTAGTTTCATCGGAGTCATTATATATTTGATTCTTCTGTTGCATTCCATTCATACTGTCCTTGACCCTCTCCTTTTGAGAAAAACTTGA 492 0.4187 MAKTGRICHLLLRFLAFSATLSAVVVMVSSHEKASFFTVSFEAKYTNSPAFKYFVIANSIVTVYGFFVLFLPAESLLWRLVVAMDMVLTMLLISSISAALAIAQVAKNGNNYAAWLPICGSVPKFCNHMTGALVASFIGVIIYLILLLHSIHTVLDPLLLRKT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1232 163 Pfam Casparian strip membrane protein domain 4 141 IPR006702 -
Mtr4g1232 163 PANTHER CASP-LIKE PROTEIN 1C1 3 161 - -
Mtr4g1232 163 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 10 153 IPR006459 -
Mtr4g1232 163 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1232 Mtr-Chr4 17894228 17896614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1232 2 134 Miscellaneous Gene Families AT3G16300 23.490 2.52e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1232 - - gmx:100809698 239.195