Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1231 ATGACAACAACACAAATGGCTGCTTCATCTTGTTCTCGTCTTACCTTAACCCACAGATTCCATAATTCCCAAATCACCCCTCATCTTCGATTCAAACCATCTCCTCTGCGCTTCTTCCTTCCATCATCATCTTCTACTCGAAAATCCATTCACCGTCCCATTCAATGTCTCTTTACCGGCCTCGTAGAAGAAATGGGTACCGTCAAGAAACTCGGAGCGGCCTCAAACGGCGGTTTCGACTTAAAGGTGGAGGCAAAGACGGTTCTTGACGGCGTCAGTCTCGGAGACAGCATCGCCGTCAACGGTACATGTCTCACCGTGACGGAATTCGACACAAAAGCTTCTGATTTTACAGTTGGGTTGGCTCCGGAGACACTAAGGAAGACTTCTCTGATTGAATTGGAACCGGGATCGCCAGTGAATCTTGAAAGATCAGTAACACCGGTTACTCGAATGGGTGGGCATTTCGTACAGGGTCACGTGGATGGCACGGGGGAGATTGTTTCTATGGTTCCTGAAAGGGATTCTTTGTGGATTAAGGTTAGGGTTAATAAGGTGGATTTGCTTAAGTATATTGTACCTAAAGGGTTCATTGCTGTGGATGGGACTAGTTTGACTGTGGTTGATGTTTTTGATGATGAAGCTTGTTTCAATTTCATGTTGGTTGCTTACACTCAGAGCAAGATTGTTATTCCTTTGAAGAATGTTGGACAAAAGGTTAATCTTGAAGTTGATATTCTTGGCAAGTATGTGGAGAGGCTTCTCCGAACTAATGCTTATGCTAGCTAG 789 0.4487 MTTTQMAASSCSRLTLTHRFHNSQITPHLRFKPSPLRFFLPSSSSTRKSIHRPIQCLFTGLVEEMGTVKKLGAASNGGFDLKVEAKTVLDGVSLGDSIAVNGTCLTVTEFDTKASDFTVGLAPETLRKTSLIELEPGSPVNLERSVTPVTRMGGHFVQGHVDGTGEIVSMVPERDSLWIKVRVNKVDLLKYIVPKGFIAVDGTSLTVVDVFDDEACFNFMLVAYTQSKIVIPLKNVGQKVNLEVDILGKYVERLLRTNAYAS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1231 262 Pfam Lumazine binding domain 59 144 IPR026017 -
Mtr4g1231 262 Pfam Lumazine binding domain 158 245 IPR026017 -
Mtr4g1231 262 PANTHER RIBOFLAVIN SYNTHASE ALPHA CHAIN 50 257 IPR001783 -
Mtr4g1231 262 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 156 255 IPR026017 -
Mtr4g1231 262 CDD Riboflavin_synthase_like 58 247 IPR001783 -
Mtr4g1231 262 TIGRFAM ribE: riboflavin synthase, alpha subunit 57 257 IPR001783 -
Mtr4g1231 262 Gene3D - 57 147 IPR023366 -
Mtr4g1231 262 SUPERFAMILY Riboflavin synthase domain-like 57 146 IPR017938 -
Mtr4g1231 262 PANTHER RIBOFLAVIN SYNTHASE 50 257 - -
Mtr4g1231 262 Gene3D - 160 261 IPR023366 -
Mtr4g1231 262 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 57 155 IPR026017 -
Mtr4g1231 262 SUPERFAMILY Riboflavin synthase domain-like 151 256 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1231 Mtr-Chr4 17887720 17888736 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1231 K00793 - gmx:100809163 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1231 4 17887720 17888736 Mtr4g1231 4 17887720 17888736 ECH