Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1218 ATGATGGTGGATTTGAGTCCATTCTCGAACGAGAATTTCGACCCAAAGAAATGGATCAACTCAGCGTGTCAGAGTCGACACCCAGAAGAGTCCTTAGACAAACATCTGGTCGATTTAGAGATGAAACTCCAGATGGTTTCCGAGGAAATCGCCGCTTCTCTTGAAGAACAAAGCGCCGCCGCACTCCTCCGTGTCCCTCGCGCCACTCGTGATGTCATCCGTCTCCGTGATGACGCCGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCAAAAACTCAAGAAGGCGGAGGGATCTTCGTCTGAGTCTATATCGGCACTCGCTAAGGTCGATGTAGTCAAGCAGAGGATGGAAGCTGCATATGAAACTTTGCAGGATGCTGCTGGATTAACTCAATTGAGTTCGACGGTGGAAGATGTATTTGCCAGTGGTGATCTCCCTCGTGCCGCTGAAACTTTGGCTAATATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAGCTTCAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTTACCGATGCATTATCCAATCGCAAGGTTGATGCTGCTCAAGATTTGCGTGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTCGAATCACAATATTCAAAGGTACATCTAAAACCAATAAAGCAGCTTTGGGAAGACTTTGAATCAAGAGAACGGGCTAATAAGTCTGCAAATGAGAAGAATGAAATGGAGAGGACTTCAAGTGGTGGTGGTTTTCAGTCAATTCCACCTGCATTGTCATTCTCCAATTGGTTACCAAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGGTTGCTTTTCCTGAAGATTATAAAACTCTTGTGCCGAGGTTGCTAAGTGAGACTATGATGGCTATAGGTGCAAGTTTCATATCTCATATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTATCAGATATTTTATCTGGGGACATGCAAAAGGGTATTAAGCTTCAGACAAAGCACCTGGAGGCCTTGATTGATTTACACAGTATCACGGGGACCTTTGCAAGGAATATTCAGCACTTATTTTCTGGTTCTGATGTACAAATTTTAATGGATGTGCTGAAAGCTGTGTACTTGCCATATGAATCGTTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTAGGAGCCCAAGGAGTTGAACTCAGTGAAACCGTTCGTAGGATGGAGGAGTCTATTGCTCAAGTTATTATACTTCTTGAAGCATCTTCCGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCGGATGAGCTGATTCTTGCCCTGGATGACATAATGTTAAAATACATTTCCACTCTACAAGAAACTCTGAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGCGATGGTACTGGAAAGAAAGAGGCAGAGAAGAAAGATGGAAGCCAAAATGCACGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCCATGGTTCAAGGGGCACTGCAGATCCTTACAGTTGCAGATAGTTTAACAAGCAGATCTTCTGTCTTTGAAGCATCTTTAAGAGCTACTCTTGCTAGACTAAGCACAACTTTATCTTTTTCAGCATTTGGTTCAAGACTAGATGAAAACCAGACTATAAATGGTAATGACAATGCGGAGCCATCTTTAGGTGGAAGGGCTGCCTTAGACATGGCAACACTACGGCTGGTTGATGTGCCTGAGAAAGCCAGGAAACTCTTCAGCCTTTTGAATCAGTCTAAAGATCCTCGTTTTCATGCACTTCCCCTTGCATCGCAAAGAGTTGCAGCATTTGCCGACACTGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGGCAACGACTCAGCGATGTGTCCCGTTTGCCAATATGGTCATCAGTTGAGGAACAGGGTGCTTTTCATCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTGACTAGTGTTGGTGAGTATCTTCTTACTTTACCCCAACAATTGGAGCCCCTTGCTGAGGGAATATCTAGCAGTGAAGCCAATGATGAAGCGCAGTTCTTTGCAACAGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTTTACATAGAACAGTTGCGTGGGATTCAGTATATTACAGATCGCGGTGCACAGCAGCTATCAGTTGATATTGATTATCTTAGTAATGTTCTTTCCGCTCTGTCAATGCCCATCCCTGCAGTTCTGGCTACATTTCACAGTTGCCTTTCTACCTCAAGAGACCAGCTAAAAGATCTTTTGAAGACAGATTCTGCAAACCAACTAGATCTGCCAACAGCAAACCTTGTATGTAAGATGCGGCAGCTGAATTTAGATTCATGA 2505 0.4411 MMVDLSPFSNENFDPKKWINSACQSRHPEESLDKHLVDLEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSSESISALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLQVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSKVHLKPIKQLWEDFESRERANKSANEKNEMERTSSGGGFQSIPPALSFSNWLPSFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLEALIDLHSITGTFARNIQHLFSGSDVQILMDVLKAVYLPYESFKQRYGQMERAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIAQVIILLEASSERCISFTGGSEADELILALDDIMLKYISTLQETLKSLRTVCGVDYGGDGTGKKEAEKKDGSQNARRVDLISNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSRLDENQTINGNDNAEPSLGGRAALDMATLRLVDVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQGAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPAVLATFHSCLSTSRDQLKDLLKTDSANQLDLPTANLVCKMRQLNLDS* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1218 834 Pfam Golgi complex component 7 (COG7) 4 829 IPR019335 GO:0006886|GO:0017119
Mtr4g1218 834 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 828 IPR019335 GO:0006886|GO:0017119
Mtr4g1218 834 Coils Coil 36 56 - -
Mtr4g1218 834 MobiDBLite consensus disorder prediction 242 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1218 Mtr-Chr4 17741876 17748228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1218 K20294 - gmx:100794449 1444.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1218 4 17741876 17748228 Mtr4g1218 4 17741876 17748228 ECH