Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1217 ATGGCTTCTTCTGTTGCAGTCAAGCGAATTTTCTCCTCAGGCCTCCTCTCCAGGTCTCTCCGTCCTGTTGCCTCTTCCGCTTCCCGTTCATTCAACACCAACGCCATGCGCCAGTACGACGAACGCTCCGATGATTCCAATGTTGCCGATTCTCGTCGTGCCGATCGCTCTTTCCCTCGCACTCGCCGCGACGATTTCCTCTCAGACGTGTTTGATCCGTTTTCTCCAAGTAGGAGTCTGAGCCAGGTGCTGAACATGGTGGATCAGTTGATGGACAATCCATTCCTCTCTGCTTCACGTGGGATTGGTGCCGGTGGAGCTCGACGCGGCTGGGATGCGAAAGAGACAGAGGATTCTCTGCTTCTTCGTTTGGATATGCCTGGACTTGGTAAGGAAGATGTGAAGATCTCTGTTGAACAGAATACCCTTACTATTAAAGGTGAAGGTGCTAAAGAAAGTGAGGAAGATGAAGAAGGTGCACGTCGATTCTCTAGCAGAATTGATTTGCCTGAGAAGCTTTACAAGATTGATCAGATTAAAGCTGAGATGAAAAACGGTGTGCTTAAGGTTGTTGTGCCTAAGATGAAGGAAGAGGAGAGGAATGATGTGATTAATGTCAATGTCGAGTAG 630 0.4873 MASSVAVKRIFSSGLLSRSLRPVASSASRSFNTNAMRQYDERSDDSNVADSRRADRSFPRTRRDDFLSDVFDPFSPSRSLSQVLNMVDQLMDNPFLSASRGIGAGGARRGWDAKETEDSLLLRLDMPGLGKEDVKISVEQNTLTIKGEGAKESEEDEEGARRFSSRIDLPEKLYKIDQIKAEMKNGVLKVVVPKMKEEERNDVINVNVE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1217 209 Pfam Hsp20/alpha crystallin family 112 208 IPR002068 -
Mtr4g1217 209 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 IPR044656 -
Mtr4g1217 209 MobiDBLite consensus disorder prediction 21 57 - -
Mtr4g1217 209 Gene3D - 66 208 IPR008978 -
Mtr4g1217 209 SUPERFAMILY HSP20-like chaperones 90 200 IPR008978 -
Mtr4g1217 209 MobiDBLite consensus disorder prediction 21 37 - -
Mtr4g1217 209 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 - -
Mtr4g1217 209 CDD ACD_sHsps-like 112 194 - -
Mtr4g1217 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 102 209 IPR002068 -
Mtr4g1217 209 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1217 Mtr-Chr4 17734600 17735721 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1217 K13993 - gmx:547852 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1217 4 17734600 17735721 Mtr4g1217 4 17734600 17735721 ECH