Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1213 ATGACTTCAAACAACAATTCCATAAATTGTCCCCCATCTTTCAATGGTGAAGGGTATGGTTATTGGAAAGAGAGAATGAAAATTTTCATTGAAGGAATTGATTGTGATATTTGGGATGCTATTGAAAATGGTCCATTTATTCCCACTCATTTAGTCAATAATGTTGTGGTGAATAAACCAAGATCCCTTTGGACCAAAGATGAAAAGAAAAAGGTTCAATACAATTTGAAAGCTAAGAACATTATCACCGCTTCACTAAGCATTGATGAATTTTATCGTGTATCAAATTGTACAACCGCCAAAGAAATGTGGGACACCCTTAAATTGACCCATGAAGGTACTACCGAGGTCAAAAGGGCTCGGATGAACACATTGACTCATGAGTATGAATTATTTAGGATGAAATCGGGAGAAAGCATCCAAGATGTGCAAAAACGATTTATCCATATAATTAATCATCTTAGAGCTCTTGGAAAAACTTTCAATAACGAGGATTTAATTAATAAAGTTCTTAGATGCTTGACTCGAAGCTGGCTACCAAAAGTGACCGCTATTTGTGAATCTAAAGATTTATCTTTTATGTCTTTGGCTACTTTGTTTGGAAAATTGCAGGAACATGAGCTTGAATTGAATCGTCTCATTGATAGTGAAGAAGGTGAAAAGAATACGAAAGGCCTTGCTCTCAAAGCTAGAATCAATGAAAGAACTTCCTTCAATCCAAATTGCAACAAGTGTGGTGAAAAGGGTCACATAAAATCCAATTGTCTTCTAAGTCAAAAGAGATATAGAAAAGGAAAGAGGGCTTATATCGCTTCGGATGACAAAGATACAAACTCATCCAATGAATCAGAAAATGAAGTAGCATATTCATGTTTCATGGCAAACCATGATGAAGATGAGGTAAATTCTATTGAATCGGAATATGACTTAACTTATGATGAGTTGTTTACTATTTGTAAAGAATTAAATGATGAGTCAACTAAGCTTAGAAAAATTGTTTCTTCCTCTAAGAAAACTATTTCCACTCTTGAATCAAAAATTGATATTTTAAACGAGGAAATAGAAATTCTTAAAGAGAAACAAATTTTTGTTAGTGAAGTTTCTTCTTGCACTTCTTGTGAAAATAAAAAGGAAAATATTTTCAAGTGTGATGATTGTAATATTTTGAAAATTGAAATTGAGGATTTGCAAAACACACTTGCAAAATTCACAAAGGGGAGAGAAAACTTGAACATCATTTTGGGAAATCAAAAGGGAACGTATAATAAAGCCGGTTTGGGCTATCGTCCAAAAAATCATGAAAAACTTTTTCGAAAATTCTTTCGCCTAAACAAAACCTCAAGTTCTCCTTTTGATAAATATTTTTATTGTGGAAGAGAAAGTCATACATCCTCTATTTGTAATTTAAGAAAGAACAATGATATGAATGATAAATGGAAGTGGATTCCAAAGGGCACTTTGCCTAATGCTAACTCTCAAGGACCCAAAATGATTTGGGTACCAAAAGCCAAAACTTAA 1518 0.332 MTSNNNSINCPPSFNGEGYGYWKERMKIFIEGIDCDIWDAIENGPFIPTHLVNNVVVNKPRSLWTKDEKKKVQYNLKAKNIITASLSIDEFYRVSNCTTAKEMWDTLKLTHEGTTEVKRARMNTLTHEYELFRMKSGESIQDVQKRFIHIINHLRALGKTFNNEDLINKVLRCLTRSWLPKVTAICESKDLSFMSLATLFGKLQEHELELNRLIDSEEGEKNTKGLALKARINERTSFNPNCNKCGEKGHIKSNCLLSQKRYRKGKRAYIASDDKDTNSSNESENEVAYSCFMANHDEDEVNSIESEYDLTYDELFTICKELNDESTKLRKIVSSSKKTISTLESKIDILNEEIEILKEKQIFVSEVSSCTSCENKKENIFKCDDCNILKIEIEDLQNTLAKFTKGRENLNIILGNQKGTYNKAGLGYRPKNHEKLFRKFFRLNKTSSSPFDKYFYCGRESHTSSICNLRKNNDMNDKWKWIPKGTLPNANSQGPKMIWVPKAKT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1213 505 Coils Coil 333 360 - -
Mtr4g1213 505 PANTHER MYOSIN-11-LIKE 5 393 - -
Mtr4g1213 505 Pfam gag-polypeptide of LTR copia-type 76 210 - -
Mtr4g1213 505 ProSiteProfiles Zinc finger CCHC-type profile. 242 255 IPR001878 GO:0003676|GO:0008270
Mtr4g1213 505 PANTHER - 5 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1213 Mtr-Chr4 17528035 17529552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1213 - - ccaj:114916030 460.299