Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1212 ATGGGTTCAGCAGCAGAAGAGAGGGGTAGCAGTAGCAATAAACTCATTGGAATAAGGTTCCTTGAGTATGTAAAAGGAAGTCCTGTTTCCCACAAAACCCACCAAGCAATTGTTCTGATTGTAACATTTCTAGCTTATGCTAGTTATCACGCCACTAGAAAAACCACTAGTATTGTGAAGAGTGTGCTTGATCCCCAATCATCTTCAACAAATTTAGGCTTCAATTTCTTTCCTTCGAGTACGAGGGTTACAAAACTTTCTTGGAAACTTGGAGATGGCTGGGCTCCATTTAATGGATCCGACGGGACATCCCTTCTTGGCCAATTGGATGTTGCTTTTCTCGCAGTTTATGCATTTGGGATGTACTTTTCTGGACATTTTGGTGACAGGTGTAATTTGAGGATTTTTTTAACTATTGGGATGGTTGGAACTGGTGTTTTCACTTCACTCTTTGGTGTAGGGTTTTGGGGAAACAATCACAATTTCTACTATTATTTAGTCATTCAAATGATTGCTGGTTTGTTTCAATCCACTGGATGGCCATCCGTAGTTGCGGTTTTGGGTAACTGGTTTGGAAAGCGGAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCATACTTCTGTCGGGAACATTGCTGGTTCTTTGATTGCTTCTGCTATGTTGGGATATGGATGGGGATGGTCTTTTGTTGTGCCTGGATTAATAATGTCTTTCCTTGGTTTGGTGGTTTTCCTAATATTGCCTGTCTCACCTGAGTCTGCCGGAGTTGAAGAAGATGATTATAGTTGTCCTAAGAAAAGCGGAGATGATGTCACAGAATCTCTCTTAAGGCAAGAAACTCCTGCTGAAGAGAAAGAGAAAGCAGTTGGGTTTATCGAGGCATGGAGAATTCCTGGGGTCGCTCCTTTTGCTTTTTGTCTGTTTTTCGCCAAATTGGTTGCATATACCTTTCTCTATTGGCTACCATTCTATGTTAGTCACACAGCTATTGATGGAAAATTTCTATCTAGTGAGACATCGGGTTCACTGTCCACTTTATTTGATGTTGGAGGAGTGCTAGGAGGAATTCTAGCAGGCCACATTTCTGACCGCTTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCAATCCCTGCTCTGTTCTTCTATCGAAGCTATGGGCACATTTCATTGGTTGTAAATGGAACATTGATGTTCGTCACTGGTATGTTTGTAAATGGGCCGTATGCTCTTATAACAACTGCAGTTTCGGCTGACCTGGGAACACACAAGTCATTGAAGGGAAACTCACGAGCTCTGGCAACCGTCACGGCTATTATTGATGGAACAGGTTCTATTGGAGCTGCAATTGGACCTTTATTAACAGGGTATATCTCTGCAAAAAGCTGGAGTGCAGTTTTCACAATGTTGATGGGTTCAGCTTTAATTGCAGGGCTGTTTCTCACCAAGCTTGTAGTGTCAGAAGTGGCCACAAAGATCGAAGAGTCAAGGTCTAATAGAACGCCGGAATGTTCACTTGATGTATAA 1539 0.423 MGSAAEERGSSSNKLIGIRFLEYVKGSPVSHKTHQAIVLIVTFLAYASYHATRKTTSIVKSVLDPQSSSTNLGFNFFPSSTRVTKLSWKLGDGWAPFNGSDGTSLLGQLDVAFLAVYAFGMYFSGHFGDRCNLRIFLTIGMVGTGVFTSLFGVGFWGNNHNFYYYLVIQMIAGLFQSTGWPSVVAVLGNWFGKRKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFVVPGLIMSFLGLVVFLILPVSPESAGVEEDDYSCPKKSGDDVTESLLRQETPAEEKEKAVGFIEAWRIPGVAPFAFCLFFAKLVAYTFLYWLPFYVSHTAIDGKFLSSETSGSLSTLFDVGGVLGGILAGHISDRLNARAITAASFMYCAIPALFFYRSYGHISLVVNGTLMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMGSALIAGLFLTKLVVSEVATKIEESRSNRTPECSLDV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1212 512 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 505 - -
Mtr4g1212 512 Gene3D MFS general substrate transporter like domains 30 261 IPR036259 -
Mtr4g1212 512 PIRSF Hexose_phosphate_transp 22 506 IPR000849 GO:0016021|GO:0022857|GO:0055085
Mtr4g1212 512 Pfam Major Facilitator Superfamily 104 424 IPR011701 GO:0022857|GO:0055085
Mtr4g1212 512 CDD MFS_SLC37A1_2 35 492 IPR044740 GO:0061513
Mtr4g1212 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 494 IPR020846 GO:0022857
Mtr4g1212 512 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 505 - -
Mtr4g1212 512 SUPERFAMILY MFS general substrate transporter 102 489 IPR036259 -
Mtr4g1212 512 Gene3D MFS general substrate transporter like domains 297 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1212 Mtr-Chr4 17504069 17506938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1212 1 511 Organic Solute Cotransporters AT3G47420 71.209 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1212 K13783 - gmx:100795072 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1212 4 17504069 17506938 Mtr4g1212 4 17504069 17506938 ECH