Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1154 ATGGCCATGGCTTCTTCATCATCATTCTCCACCATCCACCCTCGTTCTTTCTCTCTTACCACCCATAACCACCACTCTTCTTCAACATCTCTCCCACTCCCATCTCTCTCCATCATCTCCCGCCGTCGTCCACATTCTCATTCCAACAGCCTCTTCACTCCCCGTCCTCCCATAACCGCCATTTATGCATCCACTAACAGTGGTGGCGGAAGCGGAGGAGAAGGCGGTGGAGGAGGTGATGGTGGCGGCGATGATGGTGAAGAATCAGAGGATAGGGATCGAAACAGAGAAGAAGCGTTGCTGGTACTTACGGAGGTAGGGAAGTCATTGGAGAGTTTGCCAGCGGATTTAGCGGAAGCCGTTAAAGCGGGACGAGTTCCGGGTTCTATTGTGAAGAGATTCTTTGAACTGCAAAAATCAAGTGTGTTTCGATGGTTGCTTAATTTTGGAGGGTTTAGAGAAAGATTGCTTGCTGATGATTTGTTTCTTGCTAAGGTTGCCATGGAATGCGGTGTTGGCATCTTTACAAAGACTGCTGCGGAGTTGGAGAAGCGAAAAGAAAACTTTACCAAAGAACTTGATTTTGTTTGCGCTGATGTGGTAATGGCCATTGTAGCAGATTTTATGCTTGTGTGGCTTCCTGCTCCGACCGTTTCTCTTCGACCACCACCTTCCGTCAGTGCTGGACTTATTGCTAAATTCTTCTTCGGCTGCCCTGAAAATGCTTTTCAGGTGGCTTTGGCTGGAACATCATATTCCCTTATACAGAGAATAGGTGCTATTGTGCGGAACGGAGCTAAGCTATTTGCAGTTGGGACTGGTGCATCACTGATTGGAACTGGTGTAACAAATGCATTGATTAATGCGCGGAAGGTTGTTGATAAATCTTTTGCTGACGAGGCTGAAGAAGTACCAGTATTATCAACGAGTGTTGCCTATGGGGTTTACATGGCAGTATCTAGCAACTTAAGGTATCAAATTCTAGCTGGAATTATCGAACAACGGATTTTAGATCCTTTGCTGCACCAGAACAAGCTCATGTTAAGTGCAATCTGCTTTGCTGTTAGAACCGGAAACACTTTCTTGGGCTCGCTACTGTGGGTGGATTATGCTCGCTGGGTTGGAGTCCAGAAGATAAGGGATTAA 1146 0.466 MAMASSSSFSTIHPRSFSLTTHNHHSSSTSLPLPSLSIISRRRPHSHSNSLFTPRPPITAIYASTNSGGGSGGEGGGGGDGGGDDGEESEDRDRNREEALLVLTEVGKSLESLPADLAEAVKAGRVPGSIVKRFFELQKSSVFRWLLNFGGFRERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPPSVSAGLIAKFFFGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALINARKVVDKSFADEAEEVPVLSTSVAYGVYMAVSSNLRYQILAGIIEQRILDPLLHQNKLMLSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1154 381 PANTHER OS05G0388600 PROTEIN 3 380 - -
Mtr4g1154 381 MobiDBLite consensus disorder prediction 42 71 - -
Mtr4g1154 381 Pfam Protein RETICULATA-related 154 331 IPR021825 -
Mtr4g1154 381 Coils Coil 179 199 - -
Mtr4g1154 381 MobiDBLite consensus disorder prediction 42 94 - -
Mtr4g1154 381 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 3 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1154 Mtr-Chr4 15514788 15519877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1154 - - gmx:100818590 545.428