Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1050 ATGGGTTTGGAGAAAAGTTTTGTGATGGTGGTTTGTATCCTTTTGGGTATAAGTGAAAGAAGCATGGGATGGAAGCATAATTATGGAGAAGCATTGTCAAAGAGTATATTGTTCTTTGAAGGGCAAAGGTCAGGGAAATTACCACCAACACAAAGAATGACTTGGAGGAAGGATTCTGCATTTGATGATGGATTTCAACTTTATGATGATCGATTCTTTGATAAAGTTGACTTGGTTGGTGGTTACTATGATGCTGGTGACAATGTGAAATTCAATTTTCCAATGGCATTTTCAACAACAATGTTAGCATGGAGTGTAATAGAGTTTGGAAAATTCATGGGACCAGAACTTAACAATGCCCTAGATGCAATAGGTTGGGCCACAGATTATTTCCTTAAAGCCACAAATACCCCTGGATTTGTTTTTGCACAAGTTGGTGACCCACATGGTGATCACAATTGTTGGGAGAGACCTGAAGATATGGACACACCTAGAACAGCATTTTTTGTTAGTGCTGAGAATCCTGGTTCTGAAGTTTCTGCTGAAATTGCAGCTGCACTTGCTGCTTCTTCTATTGCTTTGAGGAAATTTAGTCGTAATATTGCTTATTCTGAAAGGCTTCTCCATAGGGCTAAAACGGTTTTTGAATTTGCAGATAAGTATAGAGGATCATACAATGACAGCCTTGGTCCATATGTATGCCCATTCTATTGTAATTATGGTGGCTACCAGGATGAATTGGTGTGGGGAGCAGCATGGTTACTCAAAGCTACTAAGCTTCCTTATTATTGGAATTACATTAAACAAAACATTCACAATGTGAAAAACTTTGGTGAATTTGGATGGGACTCAAAAGATGCTGGCATCAATGTTCTAGTTTCTAAGCTTCTAGTTAATAATCCAGCTGCTAAACCTTTTACCCTCAATGCTGACAAGTTTGTTTGTGCTGTGCTACCTGAATCACCCTTAGTTTCAGTCAAATATTCTAGAGGTGGGCTTCTATTCAAGACTAGTGGGAGTAACATGCAGCATGCAACAGCATACTCGTTTCTATTTTTGGTTTATGCTGGATATTTGAATAAAGCAAATAAAAAGATTGATTGTGGTGGTGGAGTTTTAGCTTCATCATGGAGACTTAAAAACCTAGCAAGAAGACAGGTAGATTACATACTAGGAAGCAACCCATTGGGTATGTCATACATGGTTGGATATGGACAAAAGTTTCCTAAAAGAATACACCATCGTGCATCATCATTACCTTCCATAGATCAACATCCAAGCAAAATTGATTGCAAAGGAGGATCCACTTATTATGAAACCCAAAACCCAAATCCCAATTTGCTTTTAGGAGCTGTTGTTGGGGGTCCTAATATCAATGATGAGTATGTTGATTCTAGAGCTGATTTTGTACACTCAGAACCTACAACATATATCAATGCACCACTTGTTGGTGTTTTGGCTTATTTTAAATCACATCCATCCTAA 1485 0.3818 MGLEKSFVMVVCILLGISERSMGWKHNYGEALSKSILFFEGQRSGKLPPTQRMTWRKDSAFDDGFQLYDDRFFDKVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKFMGPELNNALDAIGWATDYFLKATNTPGFVFAQVGDPHGDHNCWERPEDMDTPRTAFFVSAENPGSEVSAEIAAALAASSIALRKFSRNIAYSERLLHRAKTVFEFADKYRGSYNDSLGPYVCPFYCNYGGYQDELVWGAAWLLKATKLPYYWNYIKQNIHNVKNFGEFGWDSKDAGINVLVSKLLVNNPAAKPFTLNADKFVCAVLPESPLVSVKYSRGGLLFKTSGSNMQHATAYSFLFLVYAGYLNKANKKIDCGGGVLASSWRLKNLARRQVDYILGSNPLGMSYMVGYGQKFPKRIHHRASSLPSIDQHPSKIDCKGGSTYYETQNPNPNLLLGAVVGGPNINDEYVDSRADFVHSEPTTYINAPLVGVLAYFKSHPS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1050 494 Gene3D - 23 494 IPR012341 GO:0005975
Mtr4g1050 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Mtr4g1050 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Mtr4g1050 494 PANTHER ENDO-1,4-BETA-GLUCANASE 9 493 - -
Mtr4g1050 494 PANTHER ENDOGLUCANASE 9 493 - -
Mtr4g1050 494 SUPERFAMILY Six-hairpin glycosidases 24 491 IPR008928 GO:0005975
Mtr4g1050 494 Pfam Glycosyl hydrolase family 9 28 486 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1050 Mtr-Chr4 13561932 13568572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1050 7 494 Glycoside Hydrolase AT1G70710 58.621 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1050 K01179 - gmx:100775752 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1050 4 13561932 13568572 Mtr4g1050 4 13561932 13568572 ECH