Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1049 ATGATGATGATGATTACGATGGTAAAATCAGTTTCACTTAACTATAGTGATGCATTGACAAAAAGCATCTTATTTTTTGAAGGTCAAAGGTCTGGTAAATTGCCATCTTCTCAACGTATGACATGGAGAAAAGACTCTGCCCTTCATGATGGATGTGATATTCATATGGATTTGGTTGGTGGTTACTATGATGCCGGTGACAATGTAAAATTCAATTTCCCTATGGCATATACAACCACCATGCTGGCTTGGAGTGTGGTGGAATTTGGAGAACTCATGGGTCCGGATTTGCAACATGCATTAGAATCAATCCGTTGGGGAACTGATTATTTCCTCAAAGCCACAACAAAGCCAAATATTGTTGTTGCACAAGTTGGCAACCCTATTAGTGACCATGATTGTTGGGAAAGACCAGAAGACATGGACACTTCTAGAACAACCTATTATGTGTCCGAAAATAGGCCAGGTTCGGAGGTTTCAGCCGAGATTGCGGCCGCACTTGCGGCGTCATCCATTGCATTTAGAAAAATTGATGATCAATATTCTAATGTCCTTCTTGCTAGGGCTAAACAGGTGTTTGACTTTGCAAACAATCATCGTGGGTCTTATAATGATTCTATAGGCAGTGGAGTATGCCCCTTCTACTGTGATATCAATGGCTACATGGACGAATTGATTTGGGGAGCAGCATGGTTGTATAAGGCAAGTAATAATGAAAATTACATGAAATTTGTAAAATCAAATATACAATCCATACAACCCTATGAATTTGGATGGGATGCCAAGCATGCTGGCATTAATGTTCTTGTTTCTCAGTGGGTGATGAACATTTCATCAAACCAAAATCCTTTCATTCCCAATGCAGACAACCTCATATGCTCTTTGTTGCCCAAATCACCAACCAAATCAGTCACATACTCCAAAGGTGGACTTCTATTCAAACGTGGACCAGGTAACCTACAACATGTAACAGCACTATCTTTTCTACTAATTGTGTATGGACGCTACATGCATGCCAACAACAAAATAGTATATTGTGGGAATGTAACTGCCACACCATCTAAACTCATTCATCTTGCAAAAACCCAGGTGGATTATATACTAGGAAACAACCCACTTGGAATGTCATATATGGTTGGATATGGACAAAAGTATCCTCAGAAGATACATCATCGCGGTTCAACTTTACCATCATTGGATGTACACCCAAAAAATATGGGGTGTCGTGATGGAGACGAACATTTTCAATCATCGAAACCTAATATCAACGTACTAACGGGTGCCATTGTTGGAGGACCAGCCTACGATGACTCTTTTCTCGACTCGCGCCTGAATATTTCTCAATCGGAGCCAACTACATATATCAATGCTCCTTTTGTTGGTGTTTTGGCTTACTTCAAAAAACATATGTAG 1413 0.4006 MMMMITMVKSVSLNYSDALTKSILFFEGQRSGKLPSSQRMTWRKDSALHDGCDIHMDLVGGYYDAGDNVKFNFPMAYTTTMLAWSVVEFGELMGPDLQHALESIRWGTDYFLKATTKPNIVVAQVGNPISDHDCWERPEDMDTSRTTYYVSENRPGSEVSAEIAAALAASSIAFRKIDDQYSNVLLARAKQVFDFANNHRGSYNDSIGSGVCPFYCDINGYMDELIWGAAWLYKASNNENYMKFVKSNIQSIQPYEFGWDAKHAGINVLVSQWVMNISSNQNPFIPNADNLICSLLPKSPTKSVTYSKGGLLFKRGPGNLQHVTALSFLLIVYGRYMHANNKIVYCGNVTATPSKLIHLAKTQVDYILGNNPLGMSYMVGYGQKYPQKIHHRGSTLPSLDVHPKNMGCRDGDEHFQSSKPNINVLTGAIVGGPAYDDSFLDSRLNISQSEPTTYINAPFVGVLAYFKKHM* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1049 470 SUPERFAMILY Six-hairpin glycosidases 14 468 IPR008928 GO:0005975
Mtr4g1049 470 PANTHER ENDOGLUCANASE 1 469 - -
Mtr4g1049 470 Gene3D - 11 470 IPR012341 GO:0005975
Mtr4g1049 470 Pfam Glycosyl hydrolase family 9 15 463 IPR001701 GO:0004553|GO:0005975
Mtr4g1049 470 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 366 392 IPR018221 -
Mtr4g1049 470 PANTHER ENDO-1,4-BETA-GLUCANASE 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1049 Mtr-Chr4 13538298 13543216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1049 1 469 Glycoside Hydrolase AT1G70710 57.384 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1049 K01179 - gmx:100814370 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1049 4 13538298 13543216 Mtr4g1049 4 13538298 13543216 ECH