Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1047 ATGCAGCAAAGAAAATCAGCGTTGGGAAGACCTTCAGGAACCGATGGTTCTGATTATTCCTACCGTATGGTTGTTGATTCAAGGTATCAACTTGTTGCAAAGGGGAAGAAACGTCTCTCTGTCTTATTTATCATTGAGGCTTTGTTTCTGTTAATAGGAGTGATATTTGCATTTTTACCAGGAATAAAAGAGGATACACCAAATACAGTTGCCATTTCTTCTGTTATTGCTAGTGTTGTTTTGTTGATCATTGCCGATATAGGTAGAAGACGAAGCCGGTCGAGTTTATTGAGATTATATGCTGTTCTATCTTCCCTAGCATTGCTTCTATTCGCGGCTACTCTTGCTAACCGGTATTCCCTGCTGAAGGTTATCCAGTATTTTAGTAATCGGGGAACAAGCAGTTTTGATGCTGATTTTCCTAGTCTTCAAACTGGTTTGTTGGTATATATACTCACTTTTTCGCTGTTCAAGATTACTACCATCAAAGCAGTTGTATTCCTTCTTTTTAACATGACGCCTCCCAAGAAAGCCTCTTAG 540 0.3926 MQQRKSALGRPSGTDGSDYSYRMVVDSRYQLVAKGKKRLSVLFIIEALFLLIGVIFAFLPGIKEDTPNTVAISSVIASVVLLIIADIGRRRSRSSLLRLYAVLSSLALLLFAATLANRYSLLKVIQYFSNRGTSSFDADFPSLQTGLLVYILTFSLFKITTIKAVVFLLFNMTPPKKAS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1047 179 PANTHER UNCHARACTERIZED 1 179 IPR009787 GO:0005789|GO:0007029
Mtr4g1047 179 Pfam Jagunal, ER re-organisation during oogenesis 10 159 IPR009787 GO:0005789|GO:0007029
Mtr4g1047 179 PANTHER PROTEIN JAGUNAL HOMOLOG 1 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1047 Mtr-Chr4 13499014 13502827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1047 K25789 - gmx:100527413 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1047 4 13499014 13502827 Mtr4g1047 4 13499014 13502827 ECH