Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1027 ATGCAAGTGCCCCTTAGTGAGATCAAAAAGATGAGGGGAAAGCCAGCTTCAGCCAAAACCATTTTATTCCTATGCATTGCATGCTTTCTTGCTGGAACACTTTTCACTGGCCAAATGTGGACAAGCCCTTCCAGCCATGAAAGTACAACGCTACCGGTGGTCAGACATGACGGTGGTCACAAGCGGAAAGTGATTGAAGATGGACCGGGTGATGTAATGGAGGAAGTCACCAAGACTCATCAAGCTATCAAGTCGTTAGATAGAGCAATTTCAACTTTGGGAATAGAATTGACAGCATCTAAGACAAGCCAAACTGGTGGGCAGGGGCAGCACTTGAGACAACATGCTTCTAACCATAGTATACAGAAAGCTTTTGTGGTGATTGGTATTAACACTGCCTTTAGCAGCAAAAAACGACGGGATTCGATACGCGAAACATGGTTGCCTAAAGGAGATAAGCTTAAGGAACTAGAAAAAGAGAAGGGAGTTGTTGTAAGGTTTATGATTGGGCATAGCACAACACCAGGAAGCATTCTTGACAAATCACTTGATGAAGAAGAAGCAGAACACAATGATTTCCTTAGGTTAGACCATGTTGAAGGCTACCATGAATTATCATCCAAGACAAGATTATTCTTTTCAACTGTTACTTCTATGTGGGATGCTGATTTTTATGTCAAGATTGATGATGATGTACATTTAAATCTTGGTATGCTAGTGAGTACACTTGCTAAGTATCGATCAAGACCTAGGGTTTACATCGGTTGCATGAAATCTGGCCCAGTTCTATATCAAAAAGGTGTAAAGTATCATGAGGCTGAGTATTGGAAGTTTGGAGAAGAAGGGAACAAATATTTCAGGCATGCCACAGGACAAATCTATGCCATCTCAAGGGATCTTGCTGACTATATATCTAGCAATTGGCCAATATTGCACAGATATGCAAATGAAGATGTGTCTCTAGGAGCATGGTTATTGGGCTTAGAAGTTGAACATGTTGATGAACGTTCCATGTGTTGTGCTACACCCCCAGGTTTATTGTTTTTTCAAGCAGATTGTGAATGGAAGGCAAGGTCAGGAAACATGTGTGTGGCATCTTATGATTGGAAATGCAGTGGCATATGTAAGTCTGTGGAGAGAATGAAGGAAATTCACAATGCTTGTGGGGAAGGAGATGGAGCTGTTTGGAATGTTGAAATCTAA 1203 0.4148 MQVPLSEIKKMRGKPASAKTILFLCIACFLAGTLFTGQMWTSPSSHESTTLPVVRHDGGHKRKVIEDGPGDVMEEVTKTHQAIKSLDRAISTLGIELTASKTSQTGGQGQHLRQHASNHSIQKAFVVIGINTAFSSKKRRDSIRETWLPKGDKLKELEKEKGVVVRFMIGHSTTPGSILDKSLDEEEAEHNDFLRLDHVEGYHELSSKTRLFFSTVTSMWDADFYVKIDDDVHLNLGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEYWKFGEEGNKYFRHATGQIYAISRDLADYISSNWPILHRYANEDVSLGAWLLGLEVEHVDERSMCCATPPGLLFFQADCEWKARSGNMCVASYDWKCSGICKSVERMKEIHNACGEGDGAVWNVEI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1027 400 Gene3D - 113 342 - -
Mtr4g1027 400 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 15 391 - -
Mtr4g1027 400 Pfam Domain of unknown function (DUF4094) 17 102 IPR025298 -
Mtr4g1027 400 Pfam Galactosyltransferase 138 334 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g1027 400 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 15 391 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1027 Mtr-Chr4 12977422 12984005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1027 10 397 Glycosyltransferase AT1G77810 59.045 1.52e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1027 K20855 - gmx:100776291 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1027 4 12977422 12984005 Mtr4g1027 4 12977422 12984005 ECH