Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1023 ATGGCAACATCATCACTGTCTTTTTCTTCTGCCCTAAAACAGAACCACCTAAGAACAACCTTGTCCTATTTTCTGAAACAAAATCGGTGTTATTCAAAGTTAAAACATGCAAAAACAACATCATCATCAGCAGCAGATTTTGAGAAAGTGGCAGACGATGTACCAACCTCAGGAATCTGTAGACCTTTGTCTGAAATACTGAAAGAGCTGAACAAGAAAGTTCCTGATTCTCTTGTTAAAACTCGTGTTGAGAAAGATGGGTTTCATATTCGATACATTCCTTGGCATACTGTGAACCGCGTTTTGAACTTACACGCTCCCGAGTGGTCTGGTGAGGTTCGGAATATCGCCTATTCTGCTGATGCCAAATCTGTTTCTGTTGTTTATCGAGTTACTCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCAACAGATGATACAAATTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGAAGAGCTTGTGCACGCTTTGGGTTGGGGCTGCACCTTTATCATGAAGAAGCGTCATAA 561 0.4118 MATSSLSFSSALKQNHLRTTLSYFLKQNRCYSKLKHAKTTSSSAADFEKVADDVPTSGICRPLSEILKELNKKVPDSLVKTRVEKDGFHIRYIPWHTVNRVLNLHAPEWSGEVRNIAYSADAKSVSVVYRVTLYGTDAEIFRESTGTASTDDTNYGDPVQKAEAMAFRRACARFGLGLHLYHEEAS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1023 186 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 15 185 - -
Mtr4g1023 186 Gene3D DNA repair protein Rad52/59/22 61 186 IPR042525 -
Mtr4g1023 186 PANTHER - 15 185 IPR037489 GO:0000724|GO:0003677
Mtr4g1023 186 Pfam Rad52/22 family double-strand break repair protein 64 184 IPR041247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1023 Mtr-Chr4 12915010 12918920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1023 - - adu:107477634 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1023 4 12915010 12918920 Mtr4g1023 4 12915010 12918920 ECH