Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0950 ATGGAGGAATACAATGACGTTTTGTTAGAAGCTCAATTAACTGATCTTGTAGATGGTGCTGTTGATTATAGAGGGCAACCTGCAATCAGATCCAAATCTGGTTATTGGCGATCCGCTTGGTTTATCATAGGTGTGGAAGTGGCAGAGAGGGTATCATATTATGGAATTCAAGGGAATTTGATATCATATCTAACAGGACCACTCAAACAAAGCACTGCAAAAGCTGCTGAAAATGTGAATGTTTGGGTTGGAACTGCTTCTCTACTTCCTCTCTTTGGTGCTTTCATTGCTGATTCTTTTCTTGGACGCTACCGCACAATCATACTTGCTTCTCTCATCTATATTATGGGACTAGGCTTGTTAACGTTGTCGGCTATGCTGCCTTCCATCACATTTTGTTCTCCTCAGTCACAAGTTATCTTATTCTTCATCTCACTCTATCTAATTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTCGGGGCGGATCAATTTGACGAAAAACATCCTAAGGAACATAGAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACAATGGTTGCAGGTGCCTCGGCAACACTTTTAATCTTGAGTTATATACAAGATAACTATAGTTGGGTTGTTGGATTTGGAATACCTTGTGTTGTTATGATCATTGCTTTGATTGTTTTCTTGATTGGAACTATCACATATAGGTTTAACATCAATGATAATAACAAGAGTCCCTTTCTTAGAATTGGTCGTGTATTCGTCGTGGCTGCAAGAAATTGGAAAAATACCTTATCAACAACGGATATTGAAGAGGAACATGATGGACTACTTCGCCGCCATCAAAGTTCTGAACAAGTCAACTTCCTCAATAAGGCATTGCTAACACCAAAGGGATCCAAAGATGCTGATCATTGTAGCCTTGGTGAGGTGGAAGAAGCAAAGGCAGTACTAAGTTTGATTCCAATTTGGGCTACATCTTTAGTTTATGGTATTATCTTTGCTCAAATATTTACATTCTTCACCAAACAAGGGAGTTCTTTGGAGAGAACAATATTTCCTGGTTTCAACATACCTCCCGCTTCTCTTGGATCAATAGGTGGTGTTGCTATTGTTCTCTTCACTCCTATCTACGACCGTTTATTCGTGCCACTAGCAAGAGTTATAACTGGAAAGTCCTCAGGTATTACAATGCTTCAAAGAATTGGCACTGGAATTTTTCTATCTATATTCACAGTAGTACTTGCAGCCTTTGTTGAGATGAAAAGACTAAAGATAGCACAAGAGCATGGTCTTGTTGATGATCCAAACGCAATTGTTCCAATGAGTATATGGTGGTTGGTTCCTCAATACTTTTTGTTTGGAGTTTCAGAGGTTTTTACTATGGTTGGTCTTCAGGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTTGCACTCTATTTGAGTATTATTGGTGTTGGAAGCTTTCTAAGTGGCTTTCTAATTTCTTTGATAGAACATTTTAGTGGCAAAGATGGACATGATAGTTGGTTTTGTGACAATATCAATAAGACACATCTTGATTACTTTTATTGGCTACTTTCTGGATTAAGTGTCATTGGGTTTACTTTGTTCATTTACTTTGCAAAATCTTACATTTATAATCATAAAGGTGTCATCACACAAGGATAG 1686 0.3802 MEEYNDVLLEAQLTDLVDGAVDYRGQPAIRSKSGYWRSAWFIIGVEVAERVSYYGIQGNLISYLTGPLKQSTAKAAENVNVWVGTASLLPLFGAFIADSFLGRYRTIILASLIYIMGLGLLTLSAMLPSITFCSPQSQVILFFISLYLIAIGQGGHKPCVQAFGADQFDEKHPKEHRARSSFFNWWYFTMVAGASATLLILSYIQDNYSWVVGFGIPCVVMIIALIVFLIGTITYRFNINDNNKSPFLRIGRVFVVAARNWKNTLSTTDIEEEHDGLLRRHQSSEQVNFLNKALLTPKGSKDADHCSLGEVEEAKAVLSLIPIWATSLVYGIIFAQIFTFFTKQGSSLERTIFPGFNIPPASLGSIGGVAIVLFTPIYDRLFVPLARVITGKSSGITMLQRIGTGIFLSIFTVVLAAFVEMKRLKIAQEHGLVDDPNAIVPMSIWWLVPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIIGVGSFLSGFLISLIEHFSGKDGHDSWFCDNINKTHLDYFYWLLSGLSVIGFTLFIYFAKSYIYNHKGVITQG* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0950 561 CDD MFS_NPF5 36 552 IPR044739 GO:0042937|GO:0042938|GO:0071916
Mtr4g0950 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 556 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0950 561 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 93 117 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr4g0950 561 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 20 556 - -
Mtr4g0950 561 Gene3D MFS general substrate transporter like domains 7 558 IPR036259 -
Mtr4g0950 561 Pfam POT family 104 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0950 561 SUPERFAMILY MFS general substrate transporter 28 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0950 Mtr-Chr4 12256907 12261965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0950 14 551 Organic Solute Cotransporters AT1G22540 62.018 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0950 K14638 - gmx:100776720 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0950 4 12256907 12261965 Mtr4g0950 4 12256907 12261965 ECH