Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0948 ATGGCAGAATCAAACGAAGTGTTGTTAGAAGCTGAATTAGCTACTGTTGATGGAGTCGTTGACTACAGAGGACAACCTGCCGTTAGGTCCAAATCTGGTTACTGGAGATCCGCTTGGTTTATCATAGGTGTGGAAGTAGCAGAGAGGATATCATATATTGGGATTAAGGGAAACTTGATATCATATCTAACAGGACCACTCAAACAAAGCACTGCAACAGCTGCTAAGAATGTGAATATTTGGGCTGGAACTGCTTCTCTACTTCCTCTCTTAGGTGCTTTCGTTGCTGATTCTTTTCTTGGACGCTATCACACAATCATACTTGCTTCTCTTATCTATATATTGGGACTAGGCTTGTTAACACTATCAACTATTCTTCCTTCACTCGCATCTTGTTCTACTCAATCACAAGTAATCTTATTCTTCATTTCACTCTATCTAGTTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTTGGGGCTGATCAATTCGACGAAAAATATCCGGAGGAGCATAGAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACTATGGTTGCAGGGGCCACGGCAACACTTCCGATCTTGACTTATATTCAAGATAACTATAGCTGGGTTCTTGGATTTGGAATACCTTGTGTTATAATGATCATTGCCTTGATTATTTTCTTGCTCGGAACAAGGACATATAGGTTTAACATTAAGGATAATAATAAGAGTCCTTTTCTTAGAATCGGTCGTGTATTCGCTGCAGCTGTAAGAAATTGGCGAAATACCTTATCAACTACGGATATTGAAGAGGATGGACTACTTCGACGTCAAAAATTTGAACAATTCAACTTCCTCAACAAGGCATTGCTAAAACCAAAGGGATCCAAAGAAGATGAGACTTGTAGTCTTAGCGAGGTCGAAGAAGCAAAGGCAGTACTAAGGTTGGTTCCAATTTGGGCTACAACTTTGGTTTATGGTATTATCTTTGCTCAAGTTTTTACATTCTTCACCAAGCAAGGGAGTTCTATGCAGAGAACAATATTTCCTGGTTTCGACATACCTCCGGCTTCTCTTCAAACGATAACCAATGTCTCCATAGTTCTCTTCAGCCCTATCTACGACCGTATATTTGTGCCACTAGCAAGAAGTATCACTGGAAAACCCTCAGGCATCACATTGCTTCAAAGAATTGGCACTGGAATTTTCATATCAATATTTACAGTGGTATTTGCAGCCTTTGTTGAGATTAAAAGACTAAAGATAGCACAAGAGCATAGTCTTGATGATGATCCAAATGCAACTGTACCAATGAGTATATGGTGGTTGATTCCTCAATACTTTTTGTTTGGTGTTTCAGAGGTTTTTACCATGGTTGGTCTTCAGGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTTGCACTCTATTTGAGTATTATTGGTGTTGGAAGCTTTCTTAGTGGATTTCTAATTTCTTTAATAGAACATTTTAGTGCCAAAGATGGTCATGATAGTTGGTTTTGTGACAATATCAATAAGGCACATCTTGATTACTTTTATTGGCTACTTGCTGGATTAAGTGTCATGGGGTTTACTTTGTTTATTTACTTTGCAAAATCTTACATTTATAACCACAAAGGTATCATCACACAAGGATAG 1674 0.3841 MAESNEVLLEAELATVDGVVDYRGQPAVRSKSGYWRSAWFIIGVEVAERISYIGIKGNLISYLTGPLKQSTATAAKNVNIWAGTASLLPLLGAFVADSFLGRYHTIILASLIYILGLGLLTLSTILPSLASCSTQSQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEKYPEEHRARSSFFNWWYFTMVAGATATLPILTYIQDNYSWVLGFGIPCVIMIIALIIFLLGTRTYRFNIKDNNKSPFLRIGRVFAAAVRNWRNTLSTTDIEEDGLLRRQKFEQFNFLNKALLKPKGSKEDETCSLSEVEEAKAVLRLVPIWATTLVYGIIFAQVFTFFTKQGSSMQRTIFPGFDIPPASLQTITNVSIVLFSPIYDRIFVPLARSITGKPSGITLLQRIGTGIFISIFTVVFAAFVEIKRLKIAQEHSLDDDPNATVPMSIWWLIPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIIGVGSFLSGFLISLIEHFSAKDGHDSWFCDNINKAHLDYFYWLLAGLSVMGFTLFIYFAKSYIYNHKGIITQG* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0948 557 Gene3D MFS general substrate transporter like domains 9 553 IPR036259 -
Mtr4g0948 557 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 19 552 - -
Mtr4g0948 557 CDD MFS_NPF5 35 548 IPR044739 GO:0042937|GO:0042938|GO:0071916
Mtr4g0948 557 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 92 116 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr4g0948 557 Pfam POT family 103 511 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0948 557 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 552 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0948 557 SUPERFAMILY MFS general substrate transporter 29 544 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0948 Mtr-Chr4 12205983 12211530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0948 20 547 Organic Solute Cotransporters AT1G22540 63.636 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0948 K14638 - gmx:100776720 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0948 4 12205983 12211530 Mtr4g0948 4 12205983 12211530 ECH