Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0946 ATGGAAGAATCCAATGAAGTGTTGTTAGAAGCTCAATTATCTCTTGTTGATGGCGCTGTTGACTACAATGGACAGCCTGCAGTTAGGTTTAAATCTGGTTATTGGAGATCCGCTTGGTTTATCATAGGTGTGGAAGTGGCAGAGAGGGTATCATATTATGGAATTCAAGGGAATTTGATATCATATCTAACAGGGCCACTCAAACAGAGCACTGCAACAGCTGCTAAGAATGTAAATGTTTGGGCTGGAACAGCTTCTCTACTTCCTCTCTTAGGTGCTTTTGTTGCTGATTCTTTTCTTGGACGCTATCGCACAATCATACTTGCTTCTCTTATCTATATCTTGGGACTAGGCTTGTTAACATTATCAGCTTTGCTCCCTTCACTCACATTTTGTTCTCCTCAATCACAAGTAATCTTATTCTTCATCTCACTCTATCTAGTTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTTGGGGCTGATCAATTCGATGAAAAACATCCAAAAGAGCACGAAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACTATGATTGCAGGTTGCACAGCAACACTTACGATCTTGAACTATATACAAGATAACATTAGTTGGGTTCTTGGATTTGGAATCCCTTGTGTTGTAATGATCATCGCTTTGATTGTTTTTTTGCTTGGAACAAGGACATATAGGTTTAACATTAAGGTTAATGACAAGAGTCCCTTTATTAGAATTGGTCGTGTATTTGTCGCGGCTATAAGAAATTGGCGAAATAGCTTATCAACAACGGATTTTGAAGAAGAATGTGATGGGCTACTTCGCCGTCAAAGTTCTGAACAATTCAACTTCCTCAACAAGGCATTGTTAACACCAAAGGGATCCAAAGAAGATGAAACTTGTAGCCGTAGTGAGGTTGAAGAAGCAAAGGCTGTTCTAAGGTTGGTTCCAATTTGGACTTCAACTTTGGTTTATGGTATTGTCTTTGCTCAAGTTTTTACATTCTTCACCAAGCAAGGGACTTCAATGGAGAGAACAATATTTCCTGGATTTGACATACCTCCCTCTTCGCTTCAAACAATAAAATGGCTTGCAATTGTTCTCTTCTGCCCTATCTATGAGCACATATTCGTGCCACTAGCAAGAGTTATAACTGGAAAGCCCTCAGGTATCACAATGCTTCAAAGAATTGGCACTGGAATTTTTATATCAATATTCATGGTAGTATTTGCAGCCTTTGTTGAGACTAAAAGATTAAAAATAGCACAAAAATATGGTCTTGTTGATGATCCTAATGCAACTGTACCAATGAGTATATGGTGGTTGGTTCCTCAATACTTTTTGTTTGGAGTTTCTGAGGTTTTTACAATGGTTGGTCTTCAGGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTGGCACTCTATTTGAGTATTGTTGGTGTTGGAAGCTTTCTAAGTGGCTTTCTCATTTCATTGATAGAACATTTTAGTGGCAAAGATGGACATGAAACTTGGTTTTGTGACAATATCAATAAGGCACATTTTGATTACTTTTATTGGTTGCTTGCTGGATTAAGTGTGATGGGGTTTACTTTGTACATTTACTTTGCAAAATCTTACATTTATAATCACAAAGGCACTATCACACAAGGATAG 1680 0.3798 MEESNEVLLEAQLSLVDGAVDYNGQPAVRFKSGYWRSAWFIIGVEVAERVSYYGIQGNLISYLTGPLKQSTATAAKNVNVWAGTASLLPLLGAFVADSFLGRYRTIILASLIYILGLGLLTLSALLPSLTFCSPQSQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEKHPKEHEARSSFFNWWYFTMIAGCTATLTILNYIQDNISWVLGFGIPCVVMIIALIVFLLGTRTYRFNIKVNDKSPFIRIGRVFVAAIRNWRNSLSTTDFEEECDGLLRRQSSEQFNFLNKALLTPKGSKEDETCSRSEVEEAKAVLRLVPIWTSTLVYGIVFAQVFTFFTKQGTSMERTIFPGFDIPPSSLQTIKWLAIVLFCPIYEHIFVPLARVITGKPSGITMLQRIGTGIFISIFMVVFAAFVETKRLKIAQKYGLVDDPNATVPMSIWWLVPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIVGVGSFLSGFLISLIEHFSGKDGHETWFCDNINKAHFDYFYWLLAGLSVMGFTLYIYFAKSYIYNHKGTITQG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0946 559 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 92 116 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr4g0946 559 Pfam POT family 103 513 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0946 559 SUPERFAMILY MFS general substrate transporter 26 546 IPR036259 -
Mtr4g0946 559 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 20 554 - -
Mtr4g0946 559 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 554 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g0946 559 Gene3D MFS general substrate transporter like domains 9 556 IPR036259 -
Mtr4g0946 559 CDD MFS_NPF5 35 550 IPR044739 GO:0042937|GO:0042938|GO:0071916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0946 Mtr-Chr4 12156703 12165050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0946 10 555 Organic Solute Cotransporters AT1G22540 63.834 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0946 K14638 - gmx:100776720 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0946 4 12156703 12165050 Mtr4g0946 4 12156703 12165050 ECH