Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0863 ATGGCGGCGATCGAAGAGTTATCGGAGCTCGCTGATTCCATGCGTCAAGCTTCGGCGCTTCTCGCTGATGAAGATATCGACGAAACTTCGAATAATTCTAGAAGACCTTCCACTTTTCTCAACGTCGTCGCTCTCGGCAACGTCGGTTCTGGTAAATCAGCGGTGTTGAACAGTTTAATTGGACATCCAGTTTTGCCTACTGGTGAAAATGGAGCTACGAGAGCTCCAATTGTGATTGATCTGCAACGAGACACGTCGTTGAGTAGCAAATCGATTATATTGCAGATTGATAATAAGAATCAGCAAGTTTCAGCAAGTGCTTTAAGACATTCCTTGCAGGATAGGTTGAGCAAGGCTTCCTCGGCCAAAGCTCGAGATCAGATAAAATTGAAGTTACGCACAAGTACAGCACCACCTCTCATGTTGGTTGATTTACCTGGGTTGGATCAGCGCATCATGGACGAATCAACAGTTAGTGAATATGCGGAGCATAATGATGCCATTTTGGTAGTTATTGTACCAGCAGCTCAAGCACCTGAAATTGCTTCCTCTCGGGCCCTTAGATTGGCAAAGGAATACGACGGAGAAGGTACAAGAATTGTTGGTGTTATTAGTAAAATTGATCAAGCTGCATCAGACCAAAAAGCAATAGCTGCAGTTCAAGCACTTCTACTGAATAAGGGTCCTACAAAAGCACAAGATATCCCCTGGGTTGCATTAATCGGTCAATCAGTTTCAATAGCTACGGCACAGTCTGGATCTTCTGGTTCTGAAAATTCTTTAGAAACTGCATGGAGAGCAGAGAGTGAAAGCCTCAAGTCCATACTGACAGGAGCCCCTCCAAGTAAGCTTGGAAGGATAGCTTTGGTGGATGCTCTGGCACAGCAGATTCAAAATCGCATGAAGCTGCGGGTGCCTAACCTTCTTTCTGGGCTACAAGGGAAGTCTCAAGTAGTTCAGGATGAATTGGCAAGGCTTGGTGAGTCATTGGTCACCACTTCAGAGGGTACTCGTGCTATAGCCTTGGAACTTTGCCGTGAGTTTGAAGATAAGTTCCTACAGCACCTTACCTCAGGCGAGGGAACTGGTTGGAAAATTGTTGCCTGCTTTGAGGGGAGATTTCCTGATAGAATGAAGCAATTACCGTTAGATAGGCATTTTGATATCAACAATGTAAAGAGGATTGTGTTAGAAGCCGATGGTTATCAGCCATATCTCATTTCACCTGAAAAGGGATTAAGATCACTAATCAAAGGAGTTCTAGAGCTTGCAAAAGAGCCATCACGTCTTTGTGTTGATGAGGTACATCGGGTCCTGATGGATATTGTATCGGCCGCTGCCAATGCTACACCTGGTTTAGGAAGATACCCACCTTTCAAGAGAGAGATTGTGGCCCTTGCTACTACTGCACTAGAAGGGTTTAAGAATGAATCAAAGAAAATGGTGGTTGCACTAGTTGATATGGAGCGTTCTTTTGTGCCACCCCAACACTTCATTCGCTTGGTACAAAGGAGGATGGAAAGGCAACGCCGGGAAGATGAGTTGAAGGGTCGGTCTACGAAAAAAGGACATGATGCAGAGCAATCTATACTTAACCGGGCCACAAGTCCCCAAACTGGTGGAAGCATGAAATCACTAAAGGATGATAAGGATAAGGATAAGGAAAAGGACAAGTCAGGTCAGGCAGAGAAAGAAGGGCAAGAAGGCTCTGGTTTAAAGTCTGCGGGTCCTGAAGGAGAAATTACAGCAGGATTTTTGTTGAAGAAAAGTGCAAAAACTAATGGTTGGAGCAGGCGATGGTTTGTGCTTAATGGAAAAACGGGAAAGCTTGGGTATACGAAAAAACAAGAGGACAGGCATTTTCGTGGTGTTATTACATTAGAGGAATGTAACATTGAAGAGGTTCCAGATGAAAGTGATCCTCCACCAAAAAGCTCTAAGGACAAGAAGTCTAACGGACCGGACTCTAGCAAAGTCAGCCTTGTTTTTAAAATTACTAGTAGAGTCCCGTATAAAACTGTTTTGAAAGCACACAGTGCTGTTGTTTTGAAGGCCGAGAGTGCAACTGATAAGACTGAATGGATTAGTAAGATAAGTAGTGTTATACAAGCAAAGGGAGGACAAATAAGGCTTTCATCTGAGGGTGGCTCAGCGATGAGGCATAGCCTCTCTGATGGTTCCTTGGATACAATGGCTCGAAGACCTGCTGATCCCGAGGAAGAACTCCGATGGATGTCCCAGGAAGTCCGTGGCTATGTTGAAGCAGTTTTAAACAGTTTAGCTGCTAATGTGCCAAAGGCAGTTGTCCTTTGCCAAGTTGAAAAAGCTAAGGAAGACATGCTGAATCAATTATATAGCTCTGTCAGTGGTCAAAGCACGGCTAAGATTGAGGAGCTGCTTCTAGAAGATCAAAATGTAAAGCGCAGGAGAGAGCGTTATCAGAAACAATCCTCGCTTCTCTCCAAACTGACACGCCAGCTGAGTATACATGACAACCGTGCAGCTGCTGCCTCTAATTGGTCAAATGGGAGTGCAGAGAGTAGCCCAAGAAGCAGTGGACCAGGTGATGACTGGAGAACTGCCTTTGATGCAGCTAGCAATGGCTCTGTTAGCCGTAGTGGTTCGAGATCTGGATCAAATGGTCATAGTCGACATAATAGTGATCCCGCACAAAATGGTGATTTGAACTCTGGCCCCAACTCTGGCAGCCGTCGTACTCCTAACCGATTACCCCCTGCTCCACCAGGTTCTTCGGGTTACAAATATTAA 2769 0.4507 MAAIEELSELADSMRQASALLADEDIDETSNNSRRPSTFLNVVALGNVGSGKSAVLNSLIGHPVLPTGENGATRAPIVIDLQRDTSLSSKSIILQIDNKNQQVSASALRHSLQDRLSKASSAKARDQIKLKLRTSTAPPLMLVDLPGLDQRIMDESTVSEYAEHNDAILVVIVPAAQAPEIASSRALRLAKEYDGEGTRIVGVISKIDQAASDQKAIAAVQALLLNKGPTKAQDIPWVALIGQSVSIATAQSGSSGSENSLETAWRAESESLKSILTGAPPSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVVQDELARLGESLVTTSEGTRAIALELCREFEDKFLQHLTSGEGTGWKIVACFEGRFPDRMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEVHRVLMDIVSAAANATPGLGRYPPFKREIVALATTALEGFKNESKKMVVALVDMERSFVPPQHFIRLVQRRMERQRREDELKGRSTKKGHDAEQSILNRATSPQTGGSMKSLKDDKDKDKEKDKSGQAEKEGQEGSGLKSAGPEGEITAGFLLKKSAKTNGWSRRWFVLNGKTGKLGYTKKQEDRHFRGVITLEECNIEEVPDESDPPPKSSKDKKSNGPDSSKVSLVFKITSRVPYKTVLKAHSAVVLKAESATDKTEWISKISSVIQAKGGQIRLSSEGGSAMRHSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQNVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASNWSNGSAESSPRSSGPGDDWRTAFDAASNGSVSRSGSRSGSNGHSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGSSGYKY* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0863 922 MobiDBLite consensus disorder prediction 637 654 - -
Mtr4g0863 922 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 65 74 IPR019762 -
Mtr4g0863 922 Coils Coil 796 816 - -
Mtr4g0863 922 Pfam Dynamin central region 260 497 IPR000375 -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 713 732 - -
Mtr4g0863 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 315 IPR027417 -
Mtr4g0863 922 Pfam Dynamin family 42 206 IPR045063 -
Mtr4g0863 922 Gene3D Dynamin, middle domain 333 559 - -
Mtr4g0863 922 PANTHER DYNAMIN 2 854 IPR022812 -
Mtr4g0863 922 Gene3D Dynamin, middle domain 698 810 - -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 632 657 - -
Mtr4g0863 922 SMART PH_update 580 705 IPR001849 -
Mtr4g0863 922 PANTHER DYNAMIN-2A 2 854 - -
Mtr4g0863 922 ProSiteProfiles PH domain profile. 579 703 IPR001849 -
Mtr4g0863 922 SMART dynamin_3 4 238 IPR001401 GO:0003924|GO:0005525
Mtr4g0863 922 MobiDBLite consensus disorder prediction 504 528 - -
Mtr4g0863 922 Pfam PH domain 584 702 IPR001849 -
Mtr4g0863 922 Gene3D - 38 321 IPR027417 -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 864 907 - -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 504 578 - -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 544 564 - -
Mtr4g0863 922 MobiDBLite consensus disorder prediction 834 854 - -
Mtr4g0863 922 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 36 306 IPR030381 GO:0005525
Mtr4g0863 922 MobiDBLite consensus disorder prediction 529 543 - -
Mtr4g0863 922 Gene3D - 579 697 IPR011993 -
Mtr4g0863 922 ProSiteProfiles GED domain profile. 742 835 IPR020850 -
Mtr4g0863 922 SUPERFAMILY PH domain-like 580 703 - -
Mtr4g0863 922 PRINTS Dynamin signature 39 57 IPR022812 -
Mtr4g0863 922 PRINTS Dynamin signature 64 81 IPR022812 -
Mtr4g0863 922 PRINTS Dynamin signature 176 194 IPR022812 -
Mtr4g0863 922 PRINTS Dynamin signature 195 211 IPR022812 -
Mtr4g0863 922 Pfam Dynamin GTPase effector domain 740 822 IPR003130 GO:0003924|GO:0005525
Mtr4g0863 922 MobiDBLite consensus disorder prediction 834 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0863 Mtr-Chr4 11042641 11057802 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0863 K01528 - gmx:100798346 1560.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0863 4 11042641 11057802 Mtr4g0863 4 11042641 11057802 ECH