Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0860 ATGTTCAAGAAGGCGGTGGAAGCAAAATCTCAACAGAGACTTTCCGGTGCCGACAGAAAAAAGCTTAAACGAACCGTTAAAGACAAATTCCCAAGAGCTTCTGATTCTGACCTAGATATTTTACTTCCTCCTAAGACGGAGATAACTGTGGCCAAGTTTCAAACCCGGGTTCATGTGTATGCTGTGGAGGGAGGTTTTCCTGTGTTTTTCGACATTGATGGTCGTGGTTCAGATATTTTTCCAACAGTTTATGCTCTATGGATGGTCCCTGAGCTGCTGCCGGCTTTCATACTCAAGGGTGGTGAGGTTTCTCGATATGTTATAGGTGGAGCTGACTTGATGTTCCCTGGTATACTTGTGCCTCCTGAAGGTCTTCCATCATTTGCGGCTGGGGAAACATGGGCGGTGAAAGTACCCGAAAATCCTGCTCCCATTGCGGTTGGGAGTACCACGATGAGCAGCGCCGAAGCATTGAAAGCCGGATTGCGTGGAAAAGCATTGAGAATAACTCATCATTATCGCGATTTGCTTTGGGAATCAGTTGAGGGCCGTTACGTACCTAATGCAGGTTTTTTGGAAGATGCTGTGTTTGGACATCCTTCTTTATTATCATCGCCGTCTGATGATTCTGGTTTGACCGAGGCTGCTTGTGAGACATCAATTGACCAACAAAACAACACGAAAAGTGATGAAGCAGAGGGATCTCGTGTTGCAAATGATGAAAATAATGATGAAAATACAGCAGATGAAGCAACTGCTGGCGTGCGTGATTTGAAGTTAACTGATAGTGGTTCGCCTAATGACCCGAATGACCAACATACTCTATCAACTTCAGATGTAGATTTGCTTCTAGACAAGTGCCTTTTGCAAGCACTGCATACAACATTGAAGGACAAAGACCTTCCCATTCCTGGAAGCACTCTATGGTCAAACCATGTATTGCCATGTAGGCCTTCAGGAATAACTTTAGACATCAAGAAGTCATCCTACAAGAAGTTAGCTAAGTGGTTACAAGCAAAAGCCTCCTCTGGATTGATATCAGTGAAAGAAGACAAACATAAAAAAGAAGTCGTGCTATTTTCAGTTAACCGAAAACACGCTGATTATTCATCCTTTAAGCCTGAAAAAAGGCCAGCGGAGAAACCTGACCAGTCCAGTGTTCAATCTGTCAATGAAACTCGTTCGTCCAAAACTCTGGAAGTGACTGAAATCTACAAGCCAAGTGTACATGTCAATCCCATATTTTCATCTGTAGGAGCTGATACAGGCAAACTTTATACTGTTTCTGAAGCCACTGATATTGTATTCGCATACATTGAAAAACAAAATCTTGTGAAACCAACAAATAAATCTCTTGTGGTTCTAGATGCAATATTATGTGATGCACTATTTAAGGGGGCTATTAAAAAAGGAACTACGTATCCTACAGAAATTCACAAAAAAGATTTAGGGCAAACATTTGTGAGCCGAATGCAACCTCACCATGTTGTGACAAGAGGGAATGAATCTGTAGTTCGTAAAGGTGCACTAAAAACAATTCAGATACTGACAGAAAGGCGGCAAGGCAACAAGAAGGTAACCAAACTATCCGGCATGGAATCATTTCTTATAGATGCTGACGCATTAGCATCAGAACTTCAGAAGAAGTTTGCTTGCAGTACCACTGTTGGAGAATTACCAGGTAAGAAGGGGTTTGAGGTTATGGTTCAAGGTGGAGTTATTGATGACCTGGGAAGGCATTTGGTTGAACAATATGGAGTTCCAAAGAGATTTATTGAAGTTTTTGACAAAACAAAGAGATGA 1803 0.4199 MFKKAVEAKSQQRLSGADRKKLKRTVKDKFPRASDSDLDILLPPKTEITVAKFQTRVHVYAVEGGFPVFFDIDGRGSDIFPTVYALWMVPELLPAFILKGGEVSRYVIGGADLMFPGILVPPEGLPSFAAGETWAVKVPENPAPIAVGSTTMSSAEALKAGLRGKALRITHHYRDLLWESVEGRYVPNAGFLEDAVFGHPSLLSSPSDDSGLTEAACETSIDQQNNTKSDEAEGSRVANDENNDENTADEATAGVRDLKLTDSGSPNDPNDQHTLSTSDVDLLLDKCLLQALHTTLKDKDLPIPGSTLWSNHVLPCRPSGITLDIKKSSYKKLAKWLQAKASSGLISVKEDKHKKEVVLFSVNRKHADYSSFKPEKRPAEKPDQSSVQSVNETRSSKTLEVTEIYKPSVHVNPIFSSVGADTGKLYTVSEATDIVFAYIEKQNLVKPTNKSLVVLDAILCDALFKGAIKKGTTYPTEIHKKDLGQTFVSRMQPHHVVTRGNESVVRKGALKTIQILTERRQGNKKVTKLSGMESFLIDADALASELQKKFACSTTVGELPGKKGFEVMVQGGVIDDLGRHLVEQYGVPKRFIEVFDKTKR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0860 600 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2D 1 600 IPR039757 GO:0001731|GO:0003743
Mtr4g0860 600 SUPERFAMILY PUA domain-like 103 179 IPR015947 -
Mtr4g0860 600 SUPERFAMILY SWIB/MDM2 domain 396 497 IPR036885 -
Mtr4g0860 600 MobiDBLite consensus disorder prediction 370 394 - -
Mtr4g0860 600 Gene3D - 1 185 - -
Mtr4g0860 600 ProSiteProfiles Translation initiation factor SUI1 family profile. 513 585 IPR001950 GO:0003743|GO:0006413
Mtr4g0860 600 Pfam Pre-PUA-like domain 2 90 IPR041366 -
Mtr4g0860 600 SUPERFAMILY eIF1-like 479 596 IPR036877 GO:0003743|GO:0006413
Mtr4g0860 600 ProSiteProfiles PUA domain profile. 93 174 - -
Mtr4g0860 600 Gene3D - 509 595 - -
Mtr4g0860 600 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g0860 600 CDD eIF2D_C 513 594 IPR039759 -
Mtr4g0860 600 Pfam Translation initiation factor SUI1 511 588 IPR001950 GO:0003743|GO:0006413
Mtr4g0860 600 MobiDBLite consensus disorder prediction 219 276 - -
Mtr4g0860 600 CDD eIF2D_N 9 81 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0860 K15027 - gmx:100776835 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0860 4 11015830 11024312 Mtr4g0860 4 11015830 11024312 ECH