Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0833 ATGGCAAGCTTGAGAGTTACAATTGTGGTTGCAATTATGTGCATGGTGGTGGCTAGTGCACCAATAGCAGAGGCAGCCACATGTGGTCAACTAATTGATAGCCTTATTCCATGCATTACTTATCTTCAAGGTGGTCCTGGTCCATCTGCAGCATGCTGTGGTGGAGTGAAGAAACTTAATGCTGCCGCCAACACCGGCCCTGCCCGCAAGGCTGCTTGCAACTGCTTGAAAAGTGCTGCTGGTACCATTGCTCGTTTGAATAACAACCAAGCTGCTGCTCTTCCTGGCAAATGTGGTGTTAAAATTCCCTATAAGTTTAGCACTTCTACCAACTGTAATAGCATCAGGTTCTAA 354 0.4661 MASLRVTIVVAIMCMVVASAPIAEAATCGQLIDSLIPCITYLQGGPGPSAACCGGVKKLNAAANTGPARKAACNCLKSAAGTIARLNNNQAAALPGKCGVKIPYKFSTSTNCNSIRF* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0833 117 SMART aai_6 28 112 IPR016140 -
Mtr4g0833 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 Gene3D - 25 117 IPR036312 -
Mtr4g0833 117 CDD nsLTP1 27 113 - -
Mtr4g0833 117 PANTHER - 5 113 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 Coils Coil 115 117 - -
Mtr4g0833 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Mtr4g0833 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 115 IPR036312 -
Mtr4g0833 117 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Mtr4g0833 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 5 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0833 Mtr-Chr4 10706929 10708004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0833 7 116 Acyl Lipid Metabolism Gene Families AT5G59320 48.182 1.87e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0833 - - mtr:MTR_4g428370 154.066