Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0829 ATGGGTAATATGAAGTTTGCATGTGTTGTTATGATATGCATGGCTGTGTTATATGCACAACATGGAGAAGCAATTACATGTCCACAAGTCTCAAGTAACCTTGTACCATGTGTAACTTATCTTCAGAGTGGTGGTGCTGTTTCGACGCGGTGTTGTAACGGTGTTAGAAACATCGTCAGCGCTGCTAGGACCACCGCTGACCGTCGTGTTACTTGCAACTGCTTGAAGTCAGCTGCTGCTGCTTACAGGAGAATCAACCAAGGCTATGCTGCTGCACTCCCCGGAAAATGTAGGGTTTACCTTCCCTTCAAGATCAGTGCTTCCTTCAATTGTGCTAGTATCAGGTGA 348 0.4598 MGNMKFACVVMICMAVLYAQHGEAITCPQVSSNLVPCVTYLQSGGAVSTRCCNGVRNIVSAARTTADRRVTCNCLKSAAAAYRRINQGYAAALPGKCRVYLPFKISASFNCASIR* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0829 115 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Mtr4g0829 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 113 IPR036312 -
Mtr4g0829 115 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 PRINTS Plant phospholipid transfer protein signature 46 60 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 PRINTS Plant phospholipid transfer protein signature 67 82 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 CDD nsLTP1 25 111 - -
Mtr4g0829 115 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 Gene3D - 24 115 IPR036312 -
Mtr4g0829 115 Pfam Protease inhibitor/seed storage/LTP family 27 111 IPR016140 -
Mtr4g0829 115 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Mtr4g0829 115 SMART aai_6 27 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0829 Mtr-Chr4 10668463 10670794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0829 2 115 Acyl Lipid Metabolism Gene Families AT2G38540 43.103 5.87e-27 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0829 - - gmx:100814135 134.806