Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0810 ATGCAGGTGAAAGAAGAGCTGCGATCGCTCTCAAAGATTGCGTGTCCCATAACAATGACAGGCCTAATGATGTATTCTCGGTCAATTATCTCAATGCTTTTCCTTGGTCGACAAGGAAAAGCAGAGCTAGCTGGCGGTTGCCTAGCGCTTGGTTTCGCCAACATCACCGGAAATTCCATTCTCAAAGGCCTAACAATGGGAATGGATCCACTTTGTTGTCAAGCATATGGAGCAAAAAGATGGTCAGTTCTAAACCAAACACTTTTCAGAACACTCTCTCTCCTCCTACTAGTTTCAATTCCAATTTCGCTTTTATGGCTAAACATGGAACCACTCCTTCAATTACTAGGTCAAGACCCTAGTGTCACAAAAGTTGCACAAATTTACATGCTCTACTCAATTCCTGAACTATTAGCTCAATCTTTTCTCAATCCATTAAGAACTTTCTTAAGAACTCAAGGCTTAACAACACCAATTACTATGATTGCATCAATTGCAGCACTATTACACCTACCAATAAATTATTTCCTAGCTACATACTTAAAATTAGGTGTAAAGGGTATTGCATTAGCCACCGGAATGAATTCAATAAACATAACATTAGGATTGTTGGTTTATATTGTTTTCTCAAATAAACCACTTAAGCCATGGCAAGGTGTTAATATATTTGACTCAATTTTTCATGGTTGGAAACCATTGCTTAGCCTTGCAATTCCTAGTTGCCTTTCAGTTTGTTTAGAATGGTGGTGGTATGAAATAATGCTATTTCTTTGTGGTTTATTAAGTAACCCTCAAACTTCGGTTTCTACAATGGGGATACTTATTCAAACACTTGGTTTTCTGTATATCTTTCCATATTCACTTAGTGCATCTTTGACAACAAGAATCGGTCATTCGTTAGGGTCAGGACAGGCCTCTCGAGCACAAGGAACAGCTATAATTGGAATTTTGGTCGCATTTTTACTTGGAGTTTCGGCTTTTATTGGATCGATTTTAGTGAGGAAAAATTGGGGGAAATTATTTACCAACGAGGTACAAATTATTGATATGATAAGAAAAGTACTTCCGATTTTAGGGTTATGTGAAATTAGCAATTGGGCACAAACGGTATCGTGTGGGATTTTAGCTGGCACCGCACGTCCTTATGTTGGTGCTAGGATTAATTTGTGTGCATTTTATTTAATTGGGTTACCGGTTTCAATTTTCGCTTCATTTGTGTACAAATTTGAATTGGTTGGTTTGTGGTGTGGAATGTTGGCAGCACAAGTTTCTTGTTTTTGTATGATGGTGTATACATTGATTCAAACTGATTGGGAGCAACAAACTAGAAGGGCATTGGAGTTGGCTAAAACATCAACGGAGCAAGAAAGCGTAATCGATGAGGAAAGTGTATTGCTTGATTCTCTTTAA 1410 0.3801 MQVKEELRSLSKIACPITMTGLMMYSRSIISMLFLGRQGKAELAGGCLALGFANITGNSILKGLTMGMDPLCCQAYGAKRWSVLNQTLFRTLSLLLLVSIPISLLWLNMEPLLQLLGQDPSVTKVAQIYMLYSIPELLAQSFLNPLRTFLRTQGLTTPITMIASIAALLHLPINYFLATYLKLGVKGIALATGMNSINITLGLLVYIVFSNKPLKPWQGVNIFDSIFHGWKPLLSLAIPSCLSVCLEWWWYEIMLFLCGLLSNPQTSVSTMGILIQTLGFLYIFPYSLSASLTTRIGHSLGSGQASRAQGTAIIGILVAFLLGVSAFIGSILVRKNWGKLFTNEVQIIDMIRKVLPILGLCEISNWAQTVSCGILAGTARPYVGARINLCAFYLIGLPVSIFASFVYKFELVGLWCGMLAAQVSCFCMMVYTLIQTDWEQQTRRALELAKTSTEQESVIDEESVLLDSL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0810 469 Pfam MatE 239 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g0810 469 Pfam MatE 16 176 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g0810 469 TIGRFAM matE: MATE efflux family protein 17 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g0810 469 CDD MATE_eukaryotic 6 444 IPR045069 GO:0042910|GO:1990961
Mtr4g0810 469 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 455 - -
Mtr4g0810 469 PANTHER PROTEIN DETOXIFICATION 53 2 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0810 Mtr-Chr4 10430230 10431671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0810 K03327 - gmx:100786948 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0810 4 10430230 10431671 Mtr4g0810 4 10430230 10431671 ECH