Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0797 ATGGGTTACTCAACTATGGCAACCAGGCTTGTTTGTTTGGCAATTGTGTGCCTTGTGACTTTTGGTCCTAAGGCAGAAGCAGCTGTTACATCCTGTGGTCCAGTTGTGACTAGCTTATACCCTTGTGTTTCTTACATCATGAATGGTGGAAACACTGTGCCTGCTGCACAGTGTTGTAATGGAATAAGGAACCTTAATACTATGGCTCAAACCACAAATGATCGTAGAGCTGTTTGTACCTGCATTAAGAATGCTGTTAGCCAAAGTGGTTTCAGTTACACTAATTTAAACCTTAACCTTGCTGCTGGTCTTCCAAGGAAATGTGGTGTTAACATTCCTTACCAGATCAGCCCTAATACCGACTGTAACAGTGTGCACTGA 381 0.4278 MGYSTMATRLVCLAIVCLVTFGPKAEAAVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCNSVH* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0797 126 Gene3D - 30 126 IPR036312 -
Mtr4g0797 126 CDD nsLTP1 31 123 - -
Mtr4g0797 126 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 PRINTS Plant phospholipid transfer protein signature 95 112 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 PRINTS Plant phospholipid transfer protein signature 113 124 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 Pfam Protease inhibitor/seed storage/LTP family 32 122 IPR016140 -
Mtr4g0797 126 SMART aai_6 32 122 IPR016140 -
Mtr4g0797 126 PANTHER - 9 124 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 125 IPR036312 -
Mtr4g0797 126 ProSitePatterns Plant lipid transfer proteins signature. 104 125 IPR000528 GO:0006869|GO:0008289
Mtr4g0797 126 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0797 Mtr-Chr4 10295878 10297077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0797 9 126 Acyl Lipid Metabolism Gene Families AT2G15050 50.000 1.32e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0797 - - gmx:100793733 154.836