Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0781 ATGAATTATTCATCATACAACCCTAATCAACCACAACAACAACAACCCTATTACGAATACGATCCATCTCAGGTTCAACTCCAACCGTACGATCAATCTTCTTATGCTGCTGCTGCTGCTGCAGCCTATCAACCTTCTTCATACTACGCTGCCGCAGCTGCTTATAATCAACAATACGCCGCCGCTGCTGCTTATTATCCAACTGCCGTTGATACTACTCCGGTTCAACATTCTTATTATCAAACTGAACCCAACCCGGTTCATCCTCCTGGTGTTAATCCTGCTGAACCCAACCTTTTGGTTCAACCCCACAATCTTCCGATCGGGCCATCATCTCAATACAGAGGTGGGGGTGGTGGTAGATCATTCAGGCGAGGTGGTCGTGGTCGAGGTCAGTTCAACCGTGGAAGAGGACGTGGAGTGGGCGGTGGGAGACACTTTCCATCTCATTCTTCCGGACCTGCTATTTCTGATGTACCGGGTGCATCTGCTGCTGCTGGAGCCACTTATGAGGTACAAGGTTCATCATCAGTCTCAGCTCAAGTGCAAACTGCACCAGTGCAACCGCAACCACGTGGGGTATTTTGTGATATTTGTAAGATTGAGTGCAATACGTCTGAAGTTATGCAGGTGCATCTGCAAGGAAAAAAACATCTGAAGAATTTGAAACTGCATGAAGCAAAACAGAGACGCAATCCTATCAACGGATCGCAGAGTAGTCAGAATCCTACCTCTGAATTGAACTCGACAGATCAATCTGTGATAGCTCAGGAATTGGAGGACCCCACCAAAGTTATGAGCTCTGAAATTGCAGCTGATAACAAGGATGAAATGATGTTGCAGAATAATGTAGGAGAGACTTCTGATGTTCCAGCTGAAGAGGCTGATGGGTTAAGAATGGAAAACTCAGGTGCAAGGGACCGTGGATTGAAGCGTAAGACAAGAGGTGCAAAAGGTGGACGTAAACAGATGAGGACTACTGATGGTTCAGTACCTGAACAACATGTAGCTATTACATGTGAGTTGTGCAATGTTAAATGTGACACCCAACGTGTTTACCAGGCTCATATTACTGGGAAAAAGCACATGAAACGTGCATATGGTTACCAAGGTCCGGCTGGAGTAGGTAATCAAGCTTTGATCGGACTAGGTAACCAAGCTTTGGTCGGAGTAGGCAACCAAGCTCCGTCTGATGTGGTTGGTCCCCAAGCTTTGCCTGGAGCAGCAGGGCTTCAAGCACTTTACCCACCTGACATCAATGCTCTAGCGACTGCAATTAATGCTCAAGTCCAACAAGGCGATAATGATCCACAGGTACTTCTGGCTCAGCTACTGGTGAATGCACTATCTCAAGCACAAGGATCAACCACAGCAGCACCGAATGGCACCTTGGCAGCTCAGACACCAGCACCTGCATCTGTGGCCGGTTCAGGTAATGATCCCCAGTTGGTGCAGACACAAGTCTCGGAAGTTGCAGCAGATGTTGGGGTGGGAAATCCTACTGGAGAAATAAAAAATGAGATTTTATCTGTGCCGCTGGAATCAAATGCACAGGAAGGTTCAAATGTTGCCCCCAAAATTGAAGGTGGAAATTCTGAAACTAAATAA 1608 0.4683 MNYSSYNPNQPQQQQPYYEYDPSQVQLQPYDQSSYAAAAAAAYQPSSYYAAAAAYNQQYAAAAAYYPTAVDTTPVQHSYYQTEPNPVHPPGVNPAEPNLLVQPHNLPIGPSSQYRGGGGGRSFRRGGRGRGQFNRGRGRGVGGGRHFPSHSSGPAISDVPGASAAAGATYEVQGSSSVSAQVQTAPVQPQPRGVFCDICKIECNTSEVMQVHLQGKKHLKNLKLHEAKQRRNPINGSQSSQNPTSELNSTDQSVIAQELEDPTKVMSSEIAADNKDEMMLQNNVGETSDVPAEEADGLRMENSGARDRGLKRKTRGAKGGRKQMRTTDGSVPEQHVAITCELCNVKCDTQRVYQAHITGKKHMKRAYGYQGPAGVGNQALIGLGNQALVGVGNQAPSDVVGPQALPGAAGLQALYPPDINALATAINAQVQQGDNDPQVLLAQLLVNALSQAQGSTTAAPNGTLAAQTPAPASVAGSGNDPQLVQTQVSEVAADVGVGNPTGEIKNEILSVPLESNAQEGSNVAPKIEGGNSETK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0781 535 MobiDBLite consensus disorder prediction 108 161 - -
Mtr4g0781 535 SUPERFAMILY beta-beta-alpha zinc fingers 186 230 IPR036236 -
Mtr4g0781 535 SUPERFAMILY beta-beta-alpha zinc fingers 336 365 IPR036236 -
Mtr4g0781 535 MobiDBLite consensus disorder prediction 227 251 - -
Mtr4g0781 535 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 1 96 - -
Mtr4g0781 535 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 104 381 - -
Mtr4g0781 535 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 400 498 - -
Mtr4g0781 535 MobiDBLite consensus disorder prediction 512 535 - -
Mtr4g0781 535 Gene3D Classic Zinc Finger 178 227 - -
Mtr4g0781 535 Gene3D Classic Zinc Finger 320 367 - -
Mtr4g0781 535 MobiDBLite consensus disorder prediction 455 480 - -
Mtr4g0781 535 Pfam Zinc-finger of C2H2 type 339 362 - -
Mtr4g0781 535 Pfam Zinc-finger of C2H2 type 195 218 - -
Mtr4g0781 535 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g0781 535 SMART ZnF_U1_5 335 369 IPR003604 GO:0003676|GO:0008270
Mtr4g0781 535 SMART ZnF_U1_5 191 225 IPR003604 GO:0003676|GO:0008270
Mtr4g0781 535 MobiDBLite consensus disorder prediction 231 251 - -
Mtr4g0781 535 SMART c2h2final6 194 218 IPR013087 -
Mtr4g0781 535 SMART c2h2final6 338 362 IPR013087 -
Mtr4g0781 535 MobiDBLite consensus disorder prediction 301 330 - -
Mtr4g0781 535 PANTHER OS06G0651300 PROTEIN-RELATED 1 96 - -
Mtr4g0781 535 PANTHER OS06G0651300 PROTEIN-RELATED 104 381 - -
Mtr4g0781 535 PANTHER OS06G0651300 PROTEIN-RELATED 400 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0781 - - lja:Lj0g3v0199689.1 365.925