Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0704 ATGTCTCAGCTGAAGCAAATGTCGCACGCTGATAACAGTGCTCCGTCGACACCGGGAAAGTTCAAGATGGAGAAAGCTTCTTACTTCAACCGTGTACGGTGGCACGCTTCTCCGGCAAAGCTTTGTCTTTGGAGTTTTGTTTTCTCAGCTGCGATCTTGATCTTCTTTTTCCGTTCTCCGGCGAGTTCTCCTCTTCCGGCGGACCCTTCACGGCGATCATTGAGGAGTCCTTCCAACTGGGGTGGTCCCGTTTGGGAGAAACGTGTCCGTTCCTCCGCTAGAGTCCGGTCACGGAATGGATTCTCCGTTCTTGTGACCGGAGCTGCTGGTTTCGTCGGAACACATGTCTCCGCGGCGCTTAAGCGTCGCGGAGATGGTGTTCTTGGGATTGATAATTTCAATGACTATTATGACCCTTCTTTGAAGCGTGCAAGACAAGCACTTTTGGAACGTACTGGTGTTTTCATTGTTGAAGGTGATATCAATGATGCTGCTTTGTTAAGGAAGCTTTTTGAGGTTGTTCCTTTTACTCATGTCATGCATTTGGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAGAATCCTGGTTCTTATGTTCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAGGTTTGTAAAAGTGTTAATCCTCAACCTTCAATTGTTTGGGCTAGTTCTAGTTCTGTTTATGGATTGAATACTAAGGTTCCTTTTTCTGAAAGAGATAGAACTGATCAACCTGCTAGTTTGTATGCCGCTACTAAGAAAGCCGGTGAAGAAATCGCACATACTTATAATCATATCTATGGTCTTTCTTTAACTGGTTTGAGGTTTTTCACTGTTTATGGTCCTTGGGGTAGGCCTGATATGGCTTACTTCTTTTTCACTAGAGATATTTTGAAGGGGAAGACTATTCCTATTTTTGAGGCGGCGAATCATGGCACCGTTGCGAGGGATTTTACTTATATTGATGATATTGTGAGGGGGTGTTTAGGTGCTTTGGATACTGCTGAGAAGAGTACTGGAAGTGGTGGGAAGAAGAGGGGGCCGGCACAGTTGAGGGTTTTCAATTTGGGGAATACCTCGCCTGTTCCTGTTAGTGATCTTGTGGGTATTTTGGAGAGGCTGTTGAAGACTAAGGCGAAGAGGAATATTATGAAGTTGCCGAGGAATGGGGATGTGCAGTTTACTCATGCGAATATTAGTTATGCGCAGAGAGAGCTTGGTTATAAGCCGGTGACGGATCTGCAGGCTGGTTTGAAGAAATTTGTGAGGTGGTATCTGAATTACTATTCTTCTGGGAAGAAAGCTGTTGAGTGA 1323 0.4497 MSQLKQMSHADNSAPSTPGKFKMEKASYFNRVRWHASPAKLCLWSFVFSAAILIFFFRSPASSPLPADPSRRSLRSPSNWGGPVWEKRVRSSARVRSRNGFSVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVFIVEGDINDAALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKTIPIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVGILERLLKTKAKRNIMKLPRNGDVQFTHANISYAQRELGYKPVTDLQAGLKKFVRWYLNYYSSGKKAVE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0704 440 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 12 438 - -
Mtr4g0704 440 PRINTS Nucleotide sugar epimerase signature 129 145 - -
Mtr4g0704 440 PRINTS Nucleotide sugar epimerase signature 319 334 - -
Mtr4g0704 440 PRINTS Nucleotide sugar epimerase signature 354 369 - -
Mtr4g0704 440 PRINTS Nucleotide sugar epimerase signature 394 411 - -
Mtr4g0704 440 PANTHER EPIMERASE-RELATED 12 438 - -
Mtr4g0704 440 Gene3D - 102 434 - -
Mtr4g0704 440 Pfam NAD dependent epimerase/dehydratase family 103 340 IPR001509 -
Mtr4g0704 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 432 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0704 Mtr-Chr4 8834666 8836790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0704 4 438 Miscellaneous Gene Families AT4G00110 86.897 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0704 K08679 - gmx:100788739 792.727