Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0596 ATGGTTCCTCCTCATAGTTCACTATACTATTGTTGTCAGTTTGTACTTACTTTTGCACTTTTTAGTTTGCATATGTTAACTCCTCTTGAAGCTTCTGGCTCAAGAGTTGAACACCTTCCTGGTTTTCAAGGGCCGCTCCCTTTTGAACTTGAAACGGGGTACTTGGGGTTAGGGGAAACAGATGACGACATGCAAGTGTTCTATTATTTTGTTAAGTCAGAAAATAATCCTCAGAAAGATCCTCTTATGCTTTGGTTATCTGGTGGTCCTGGCTGTTCTTCTTTTTCTGGACTTGCTTATGAAATAGGTCCATTTGCATTTGAAATCAAGGAGTATGACGGGAGCGTGCCTAGTTTGGTCTTGAGACCACAATCATGGACAAAGATATGCAGCATTATTTTTGTAGATCTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGGATCACCGGAGCGACTGGAAACTAGTTTACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCTGAATTTCTTTCAAATGAATTCTACATTGTAGCTGATTCATACGCTGGCATTCCTGTCCCAGCCATTCTTCAAGAAATTTCAAATGGAAATGAAAAAGGACTCCAACCATTGATAAATCTCCAGGGATATCTGCTAGGGAACCCCTTAACATCATATAGAGAAGATAATTATCGAATTCAATATGCTCATGGAATGGGACTCATCTCTGATGAACTGTATGCGTCACTGCAGAGAAGTTGTAAAGGAGAGTATATTGATGTAGATTCCAGAAATGAGTTGTGTTTAGGAGATCTCGAGTACTTTCATGAGTGTCTCTCAGGAATTAATTTGTTCAACATTGTGGGTAGCTTTTGTGAAGATGATTTGCATATGTGGAGGAGATCTTTGACTCAGGAGCTGAATGCGTCTCTTAATTCTCGTCTCACAGTCCCCGAATTAAGATGCCGAAATTATGGTTTTTACCTCGCCACTAAATGGTTTAGCGATGAGAGTGTTCGCAAGGCACTGCATATTCGAGAGGGTACCATAGGAAAATGGGAACGATGTTACCGTACTGATTTTGAGCGTGAGATTTTTAGTAGCGTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGTGGGGATCATGATGTAGTTGTTCCTTTCATCTCTACTCAAGCATGGATAAGGGATCTAAACTACTCCATTGTAGATGATTGGAGGTCATGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAACCAAATGACATATGCAACTGTGAAGGGTTCAGGACATATAGCTCCTGAGTACACTCCTGAGCTATGTTTTCCCATGTTCACTAGGTGGATATCTAATTTGCCTTTGTAA 1401 0.404 MVPPHSSLYYCCQFVLTFALFSLHMLTPLEASGSRVEHLPGFQGPLPFELETGYLGLGETDDDMQVFYYFVKSENNPQKDPLMLWLSGGPGCSSFSGLAYEIGPFAFEIKEYDGSVPSLVLRPQSWTKICSIIFVDLPLGTGFSYAKNVTDHRSDWKLVYHTHQFLRKWLIDHPEFLSNEFYIVADSYAGIPVPAILQEISNGNEKGLQPLINLQGYLLGNPLTSYREDNYRIQYAHGMGLISDELYASLQRSCKGEYIDVDSRNELCLGDLEYFHECLSGINLFNIVGSFCEDDLHMWRRSLTQELNASLNSRLTVPELRCRNYGFYLATKWFSDESVRKALHIREGTIGKWERCYRTDFEREIFSSVEFHANLSKKGYRSLIYSGDHDVVVPFISTQAWIRDLNYSIVDDWRSWFVNGQVGGYTRTYSNQMTYATVKGSGHIAPEYTPELCFPMFTRWISNLPL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0596 466 Pfam Serine carboxypeptidase 40 463 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 Gene3D alpha/beta hydrolase 39 465 IPR029058 -
Mtr4g0596 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 465 IPR001563 GO:0004185|GO:0006508
Mtr4g0596 466 SUPERFAMILY alpha/beta-Hydrolases 36 465 IPR029058 -
Mtr4g0596 466 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0596 Mtr-Chr4 7543979 7551743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0596 32 59 Calmodulin-binding Proteins AT2G22960 71.429 7.35e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0596 K16296 - gmx:100780069 718.383