Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0577 ATGGCAACTTCTGTGACAATTGTTGGAGCCATTAACATGGCACAGTTGAAATTGAATGGCTCTAGCAGTGGAGTTCCTATGACAAATTCAGCATTTTTTGGAACAAGCCTTAAGAAAGCGAGATCTGCGATTTCCAGCCAGAAGAGTTTGTCTGGTAATTTTAAGGTTTCGGCAAAAATTGACTATAATGAGGAGAAGCAGACCTCAAAGGACAGATGGGCTGGGCTTGCTTATGACACCTCGGATGACCAACAGGATATCACTAGGGGAAAGGGAAAGGTGGACAGTGTCTTTCAAGCTCCAATGGATGCTGGAACTCACTATGCTGTCATGAGCTCCTATGATTATATCAGTACTGGTCTTCGCCAGTACAATATGGACAACACAGTTGATGGCTTGTATATTGCACCTGCATTTATGGACAAGCTTGTTGTTCACATCACTAAGAACTTTCTCAACTTGCCAAATATTAAGATTCCTCTCATATTGGGCATTTGGGGAGGCAAAGGTCAAGGAAAGTCATTTCAATGTGAGCTTGTATTTGCCAAGATGGGAATCAGCCCTATAATGATGAGTGCCGGAGAATTGGAAAGTGGAAATGCAGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCGTCCGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTAGAATGGGTGGCACTACTCAATACACAGTCAACAACCAGATGGTAAATGCAACCCTCATGAACATTGCTGACAACCCTACCAATGTTCAACTTCCCGGTATGTACAACAAAGAAGAGAATGCCCGCGTCCCTATCATCGTCACTGGCAATGACTTCTCTACGTTGTATGCTCCTTTAATTCGTGATGGACGTATGGAAAAATTCTACTGGGCACCTACTCGTGACGATAGGGTTGGTGTCTGTCAAGGTATTTTCAGGACAGATGGTGTCCCTAAGGATGACATTGTCAAGATTGTCGACACATTCCCTGGACAGTCAATTGATTTTTTTGGTGCCTTGAGGGCGAGAGTGTATGACGATGAGGTCAGGAATTGGATATCTGGTATCGGTGTGGAGAGTATTGGGAAAAGGCTTGTGAATTCAAAAGAGGGACCTCCAACTTTTGAGCAACCAAAGATGACTATTGACAAACTACTAGAGTATGGAAATATGCTTGTCCAAGAACAAGAGAATGTGAAGAGGGTCCAATTAGCTGACAAATACCTTAGTGAGGCAGCTCTTGGAGATGCAAATGACGATGCTATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAGCAAGTTCCTTTACCTGTCCAAGAAGGTTGCGCTGACCCTTCTGCAGAAAACTATGATCCGACAGCCAGAAGTGACGATGGAAGTTGCACATACACTTTTTAG 1431 0.4389 MATSVTIVGAINMAQLKLNGSSSGVPMTNSAFFGTSLKKARSAISSQKSLSGNFKVSAKIDYNEEKQTSKDRWAGLAYDTSDDQQDITRGKGKVDSVFQAPMDAGTHYAVMSSYDYISTGLRQYNMDNTVDGLYIAPAFMDKLVVHITKNFLNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCQGIFRTDGVPKDDIVKIVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVESIGKRLVNSKEGPPTFEQPKMTIDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANDDAIKTGNFYGQGAQQVPLPVQEGCADPSAENYDPTARSDDGSCTYTF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0577 476 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 474 - -
Mtr4g0577 476 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Mtr4g0577 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 333 IPR027417 -
Mtr4g0577 476 MobiDBLite consensus disorder prediction 454 476 - -
Mtr4g0577 476 Gene3D - 125 309 IPR027417 -
Mtr4g0577 476 PANTHER - 1 474 IPR044960 -
Mtr4g0577 476 Gene3D - 310 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0577 Mtr-Chr4 7344058 7348981 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0577 - - gmx:100795298 846.269