Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0524 ATGGAAACCATTCCTCTCTTTGTGATATGCTTTCTCATACAACTCTTCACATTCCAAACTCCCACACGTGCCACCCTCCCCGGCACGTGGGAGCTTCTAGTCCAAAACGCAGGTATAGCCTCAATGCACACAACAGTAACACGCTTCAACACCGTTATCCTCTTAGACCGAACCAACATCGGTCCAACCCGTAAACTCCTCCCAAAAAACCATTGCCGGTTCACCAAAACCAAACCGGATTGTTACGCCCATTCAGTCCTCTTCGACCCCATAAAAAACCAACTCCGTCCCTTAAAAATCCTCACCGACACATGGTGCTCGTCCGGTTCATTTCTCCCAAACGGTTCACTCTTACAAACCGGTGGTGATTTAGACGGGTTTAAAAAGATCCGAATATTCAACCCGTGTGATTCAACCGGGTCTTGCGATTGGGAAGAGTTAAACGACGTCGAATTAAGCGAAGGTCGTTGGTATGCGACGAATCAAATTCTTCCAGATGGTTCCATCATCATCATCGGTGGAAGAGGTTCAAACACAGTTGAATTTTACCCGAAACGCGAAAACGGTGTCGTTTTGTTTCCGTTTCTACAAGAAACTGAAGATACACAAATGGATAATTTATACCCGTATGTTCATCTCCTTCCTAACGGTAAACTTTTCGTGTTCGCGAACACGAAATCGGTTATGTATGATTTTAACGAAAATCGTGTGGTTCGGGTTTACCCGGAGTTAACGGGTGGACCGAGAAATTATCCGTCGGCGGGGAGTTCGGTGATGCTGGCTTTAGAAGGTGAATTTTCAGAGGCGGTGGTTGTTGTTTGTGGCGGTGCTCAATACGGTGCGTTTCTTGAACGGAATACGGATATTCCGGCGCATGGGAGTTGTGGGCGGATAATGGCAACGGGATCCGACCCGGTTTGGGAAATGGAGGATATGCCGTTTGCGAGAATTATGGGTGATATGGTAATTTTACCAACCGGTGATGTTTTGATTATAAATGGAGCTATGAAAGGTACACAAGGTTTTGAAATGGGTTCGGATCCGTGTTTGAATCCGGTTTTATATCGACCTGGTGAACCGGTTGGGTTACGGTTTATGGTTTTGAATCCGGGTACTGTGCCGAGACTTTATCATTCAACGGCGAATTTGTTACCGGATGGACGGGTTTTACTAGCGGGTAGTAACCCGCATGTGTTTTATCGTTTTGTGGATGTTGAGTTTGCGACAGAGTTAAAAATTGAAGCATTTTCACCGGAGTATTTGGATTCGGATAAGGCGAATATTCGACCCAAGATATTGGAAGTGCCTGAGACAGTGTTGTATGGTGTAGGATTTGATGTTGTTGTGAGCGTGCCTTTGCCTGTTGTGGGAATTATTGAAGTGAATTTAGGTAGTGCTCCTTTTGCTACACATAGTTTTTCTCAAGGTCAACGATTGATCAAACTTGGGGTTGCCTCTGCGATGGTCGATGGTGATCAGAGGTGGAGGATCCGATGTACAGCCCCACCAAGTGGGATGGTTGCGCCGCCAGGATATTATATGTTGTTTGCTGTTAACCAAGGTGTGCCAAGTGTGGCACGTTGGATACACATGTCATAG 1599 0.4597 METIPLFVICFLIQLFTFQTPTRATLPGTWELLVQNAGIASMHTTVTRFNTVILLDRTNIGPTRKLLPKNHCRFTKTKPDCYAHSVLFDPIKNQLRPLKILTDTWCSSGSFLPNGSLLQTGGDLDGFKKIRIFNPCDSTGSCDWEELNDVELSEGRWYATNQILPDGSIIIIGGRGSNTVEFYPKRENGVVLFPFLQETEDTQMDNLYPYVHLLPNGKLFVFANTKSVMYDFNENRVVRVYPELTGGPRNYPSAGSSVMLALEGEFSEAVVVVCGGAQYGAFLERNTDIPAHGSCGRIMATGSDPVWEMEDMPFARIMGDMVILPTGDVLIINGAMKGTQGFEMGSDPCLNPVLYRPGEPVGLRFMVLNPGTVPRLYHSTANLLPDGRVLLAGSNPHVFYRFVDVEFATELKIEAFSPEYLDSDKANIRPKILEVPETVLYGVGFDVVVSVPLPVVGIIEVNLGSAPFATHSFSQGQRLIKLGVASAMVDGDQRWRIRCTAPPSGMVAPPGYYMLFAVNQGVPSVARWIHMS* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0524 532 PANTHER SECRETED PROTEIN-RELATED 8 530 - -
Mtr4g0524 532 Pfam Galactose oxidase-like, Early set domain 429 530 IPR015202 -
Mtr4g0524 532 PANTHER - 8 530 - -
Mtr4g0524 532 CDD E_set_GO_C 426 531 IPR015202 -
Mtr4g0524 532 Pfam Glyoxal oxidase N-terminus 42 276 IPR009880 -
Mtr4g0524 532 Gene3D - 25 428 IPR037293 -
Mtr4g0524 532 SUPERFAMILY Galactose oxidase, central domain 85 422 IPR011043 -
Mtr4g0524 532 Gene3D Immunoglobulins 429 532 IPR013783 -
Mtr4g0524 532 SUPERFAMILY E set domains 427 531 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0524 Mtr-Chr4 6586085 6588002 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0524 - - ahf:112748634 828.935