Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0444 ATGAACCCTTCAGAAACAATGAAGCTTCTTAGGAAAAAGCTTTCTCTTCCAATCATTATTACCACAATCTGCATTCTTCTCTTCTCTATAGTTTTGTTTGCTGAGAGGCTCAGTTTCATTTCTTCCACTTCTATTTTCAAGTTCAAAACATGCCCTAGAAAGCACATCAAATCAAAATCTAATGACAGAAAAATTGAGGATGTGGTTTTAAATGCCTCATGGATTGATGATAGGTTTGATTTTGATCCAGAAGAATGCAATGTTGCTAATGGAAAATGGATATTTAACAGTTCAATAAAGCCTTTATACTCAGATAAAAGCTGTCCATACATAGATAAACAATTTTCTTGTGTCAAGAATGGAAGGAATGATTCTGATTATCTTCATTGGGAGTGGCAGCCAGAAGATTGTACCTTGCCACAATTTAATCCAGAGATAGCCCTCAAAAAGCTTGAAGGAAAGAGGTTGCTATTTGTAGGAGATTCACTTCAAAGAAACCAATGGGAATCATTTGTTTGTTTGGTTCAAGGTATTATACCGGAAAAGGAGAAGTCAATGAAACGAGGGCGCGTTCGTTCGGTCTTCAAAGCCAAGGAATATAATGCTACTATAGAATTCTATTGGGCACCATTTCTTGTGGAGTCCAATACTGATATTCATATAATAGGGGATCCAAAGAAGAGGATAATAAAAGTTGATGAAATTACTGAGCGTGCCAAAAATTGGACAGGAGCTGATATCCTTGTTTTCAATACCTATGTTTGGTGGATGAGTGGTCTTAGAGTTAAAGCATTGTGGGGCTCATTTAGCAATGGAGAAGAAGGGTACGAAGAACTTGATACATCAATTGCTTACAACTTAGGTTTGAGGACATGGGCAAATTGGGTGGACTCAACTATCAATCCAAACAAAACTAGAGTCTTCTTCACAACTATGTCCCCTGCACATACAAAAAGTGCTGATTGGGGAAACAAGAATGGTACAAAATGTTTCAATGAAACAAGACCAGTGAAAAAGAAGAATCATTGGGGAAGTGGTTCAAATAAAGGTATGATGAGTGTTGTAGCCAAAGTTATCAAGAAAATGAAAGTTCCAGTAACAGTCATCAATATTACACAAATTTCTGAGTATAGAATTGATGGTCATTCCTCAGTTTATACTGAAACTGGTGGCAAATTGTTAAATGAAGAGGAAAGGACTAATCCATTGAATGCTGATTGTATACATTGGTGTTTGCCTGGTGTTCCTGATACTTGGAATCAAATATTCTTTGCAATGTTGTGA 1284 0.3653 MNPSETMKLLRKKLSLPIIITTICILLFSIVLFAERLSFISSTSIFKFKTCPRKHIKSKSNDRKIEDVVLNASWIDDRFDFDPEECNVANGKWIFNSSIKPLYSDKSCPYIDKQFSCVKNGRNDSDYLHWEWQPEDCTLPQFNPEIALKKLEGKRLLFVGDSLQRNQWESFVCLVQGIIPEKEKSMKRGRVRSVFKAKEYNATIEFYWAPFLVESNTDIHIIGDPKKRIIKVDEITERAKNWTGADILVFNTYVWWMSGLRVKALWGSFSNGEEGYEELDTSIAYNLGLRTWANWVDSTINPNKTRVFFTTMSPAHTKSADWGNKNGTKCFNETRPVKKKNHWGSGSNKGMMSVVAKVIKKMKVPVTVINITQISEYRIDGHSSVYTETGGKLLNEEERTNPLNADCIHWCLPGVPDTWNQIFFAML* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0444 427 Pfam PMR5 N terminal Domain 84 137 IPR025846 -
Mtr4g0444 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 427 IPR029962 GO:0016413
Mtr4g0444 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 139 426 IPR026057 GO:0016740
Mtr4g0444 427 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0444 Mtr-Chr4 5512247 5515547 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0444 - - gmx:100790014 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0444 4 5512247 5515547 Mtr4g0444 4 5512247 5515547 ECH