Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0421 ATGGTTGGAAAAGCCATGGCTGTGACTTCGCGCGAAAAACTCGCGAGTCTCGTGCATTCAGCGAAATTAGCCAGTGATATACCATCTAAGATTGAATCATTGCGCAGATTGAAAATTGAACTTCCTCAAGAAGATCCTGTTCTTCTCACTGAATTCCTCCCTCCAATTTTCGATTTTCTTTCCGATCAGTTCAGTCCTGTTCGCAAATTCGTCACTGAGATGATTGGTGAAATTGGATTGAAGAACACAGAATTCTTGCCTGATATTGTGCCAGTGTTGATTGATGTATTGGATGATGATACACCTGCTGTTGTTCGCCAAGCTATACTTTGTGGAATCCGTTTGTTTCGTTCCACACTTGAGAAAATTGCCATTCAGGGTCTATTTTCTAGTGATTTAGACAGTGCTGTTGAATCTGCATGGGAGTGGATGGTTAAATTCAAAGACAAAGTATACTCAATAGCATTTCAAAATGGGAGGGGTGGAGCAAAGCTGCTGGCACTGAAATTTGTTGAAGCAGTTATTCGTCTTTACACACTTGATCCTAATGGTTCCGCAGAACCCAATTCTCATCAAGGAAAACGACCGGTATTTAATATATCATGGCTGAGGCGGGATCATCCTGTACTTAACATTGGAGATATGTCAATGGAAGCCAGTAATAGTTTGGGTCTCTTGCTTGATCAACTCAGGTTTCCAACTGTCAAGTCTCTTGGTAACTCGGTAATCATTGTGCTAATTAAAAGCCTTTCAGCCATTGCAATAGAAAGGCCTGCATTCTATGGACGCATCTTGCCCGTTTTGCTCAGTTTGGAACCCTCAACCTCTGTTGTCAATGGGGTCTGTGTGTCTGCAGCACATCTTGCTTTAAAGAAGGCCTTTCTTACGTGCACAGAATGCACACATCCAAGTGCTGCCCCGTGGAGAGATCGTTTGGCAGGTGCCTTGAAGGAGATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCATCCAATCTCTGCAAGTAACGAAAGTATATTACAGAGAGAGGAGGATTATCAACCAGTTATTATCAAGGAAGAGGATACTGCAGGAAGTTCGTTTGATTCAGGGCACGTTAATTTGGGACGAAAACGATCAGGATCACAAAATGGCAGTGATTTAGCTGAAGATGCAGATGTTCCTGGAAAACGTGTTAGAACAACAACTGATGGTTTAAAAACACCTAAAATGGAGTTAGATGAATGTACTGCTAACACACAAAATGACACTCCTTCGACTGTACCAGCATTTTCAAAAGGAGATGTGGATAACGGGCCTGTACAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAATGGCTGTTGCATCTTTGGAAATTCTTATCTCAAATATTTCTGCTGACTTGTTAGCTGAGGTGGTGATGGCAAATATGCGTTATCTGCCTCCAAATTGCCCTAATGCTGACGGAGATGAACAGTTGCATGACATTAGTATATTTGGTTCTCAAGACAAGGCTAAATATCCACAATCATTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTTCCACCTGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGATTTAGTGAAATCTCAAGGGGACGAAGAAATTTCTTCAACTGGAGTAGATAGCAGTGTTATCCATTCTGGCATGATTCTTTCATCTCAAAATGCACCATCCCCTACTGATTTTCCATCTTCTGATACTTGTATACCTGGAGTGGAGAATGTCAGTACATCTCTGCCTCCTGACATAGATGATGTAGGCAATTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAAATGATGCATTGTCAGAAACTTTGGCTGCTCCCTCATTGGCTTCCACTGATATGCAAATAGAAGATGCCAGTCAAGAGCAAGCTACAAGTTTAGATAATAGGTCACCCTCGAACTTAGTTCCATCAATGTCGGCAGATAAATCTGAAGAGCTGAGCCCAAAAGCAGTTGCTCCAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGCTGTGTTGCCTTCTCGTCTAGTATTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAAAGGGATCATTTGCAAACATCATGCTTTATGCGCATCATTGATGCATATAAGCAAATATCTGTAGCTGGAGGCTCAAAAGTTCGATTTTCGATACTTGCTTATTTAGGAGTCGAGTTTCCTTTGGAATTAGACCCGTGGAAATTGTTGCAAAAGCATATTTTGATTGATTACTCAGGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAAGCTGAAGTGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCATCGGATAAATCATTAAGTAAACTGCTCGGCGAATCTCCTTATTTACCAAAATCAGTTTTAAAGATTTTAGAGAACATGTGCTCTCCTGGAAATGGGGATAAGATTGAAAAGGAATCACACACATTGAATGTGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGAGAAACTTGTTTAAAAATTGCTTTACAGAGTGCAGTGCATCACGTGGAAGAAGTGCGGATGAAAGCAATACGCCTGGTAGCAAACAAACTTTATCCTTTATCATCAATTTCTAAGGAAATAGAAGATTTTGCAAAGGAAATGGTGTTCTCAGTGATGAGTAGTGATGCTTCTGAAGCTACTGATGAAGGGTCCGTTGCTGATTCACAAAAGGGACCTGATGTTGAAAAGGTTATAAATGAACCATTGTCTTTGAGTGGCAGTACTAAGGATGTCTCAGATAATCGGCAATCAAGCACATCTGAGGGCACCTCGCCACTTTCAGTTTCCGAGGCTCAGAGGGGCATGTCATTGTTTTTTGCTTTGTGCACAAAGAAACACTCTCTCTTTCGCGAAATATTTGTCATCTATAGAAGCACATCAAAAGCAGCAAAGCAGGCTATTCATCGTCAGATTCCCATACTAGTGCGTACATTGGGTTCATCTTCAGATCTCCTTGAAATTATATCGGATCCCCCAAATGGAAGTGAGAATCTCCTAATGCAGGTGTTGCATACACTTACTGATGGTACGATCCCTTCTAAGGATTTAATAGTTGCCGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGATTCTTATTCCAATATTGCCATTCCTACTGAAAGATGAGGTAATGGCGGTTTTTCCAAACATTGTTAACCTGCCTCCGGAGAAGTTCCAAGGAGCACTTGGTCGCATACTGCAGGGATCATCGCAATCTGGTCCAGTGCTTACACCAGCTGAAGTATTAATTGCTATTCATGGAATTGATCCGGAAAGAGATGGAATTCCCTTAAAAAAGGTAACTGATGCGTGCAATGCTTGCTTTGAGCAGCGACAAACTTTTACTCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTCCCTTTACTGTTCATGCGTACAGTATTACAAGCAATAGGTGCTTTTCCAACACTGGTGGACTTTATCATGGGGATTCTTGCTCGTCTTGTAAAGAAGCAGGTATGGAAATACCCAAAGTTGTGGGTAGGATTCTTGAAGTGTTTGCAATTGACAAAACCTCAATCATTTGGTGTTTTGCTTCAGCTACCTCCACCACAACTGGAAGCTGCATTAAATAGAATTGCTGCACTGAAGGCACCATTGATTGCCCATGCCAGCCAGCCAGATATACAATCTTCACTTCCCAGGTCTGTGCTGGTTGTTCTTGGCATTGTTTCCGATTCTCAGGTTCCAAGTCAGCCACAAACTAGTCAAACACAGACAGGTGAGACAAGCAACTCAGATAAGGACACAATGACAGAAAAATCCAAAGAATCGTCTACAGCAAGCTAA 4017 0.4192 MVGKAMAVTSREKLASLVHSAKLASDIPSKIESLRRLKIELPQEDPVLLTEFLPPIFDFLSDQFSPVRKFVTEMIGEIGLKNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIRLFRSTLEKIAIQGLFSSDLDSAVESAWEWMVKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYTLDPNGSAEPNSHQGKRPVFNISWLRRDHPVLNIGDMSMEASNSLGLLLDQLRFPTVKSLGNSVIIVLIKSLSAIAIERPAFYGRILPVLLSLEPSTSVVNGVCVSAAHLALKKAFLTCTECTHPSAAPWRDRLAGALKEMQSEGKADQVFHPISASNESILQREEDYQPVIIKEEDTAGSSFDSGHVNLGRKRSGSQNGSDLAEDADVPGKRVRTTTDGLKTPKMELDECTANTQNDTPSTVPAFSKGDVDNGPVQQLVAMFGALVAQGEMAVASLEILISNISADLLAEVVMANMRYLPPNCPNADGDEQLHDISIFGSQDKAKYPQSFVAGVMSLSSTFPPVASLLDAHQSVSNDLVKSQGDEEISSTGVDSSVIHSGMILSSQNAPSPTDFPSSDTCIPGVENVSTSLPPDIDDVGNLESGIPGLDSFGRNDALSETLAAPSLASTDMQIEDASQEQATSLDNRSPSNLVPSMSADKSEELSPKAVAPDVNSLVSSTATSAVLPSRLVLPKMIAPVVDLADEQRDHLQTSCFMRIIDAYKQISVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSGHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKIEKESHTLNVDRVTQGLSAVWSLILLRPPIRETCLKIALQSAVHHVEEVRMKAIRLVANKLYPLSSISKEIEDFAKEMVFSVMSSDASEATDEGSVADSQKGPDVEKVINEPLSLSGSTKDVSDNRQSSTSEGTSPLSVSEAQRGMSLFFALCTKKHSLFREIFVIYRSTSKAAKQAIHRQIPILVRTLGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIVAVKRLHDSKLKDAEILIPILPFLLKDEVMAVFPNIVNLPPEKFQGALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILARLVKKQVWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQVPSQPQTSQTQTGETSNSDKDTMTEKSKESSTAS* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 562 585 - -
Mtr4g0421 1338 Pfam Symplekin/PTA1 N-terminal 102 319 IPR032460 -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 964 987 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 562 602 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 1303 1338 - -
Mtr4g0421 1338 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Mtr4g0421 1338 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1241 - -
Mtr4g0421 1338 Gene3D - 2 345 IPR011989 -
Mtr4g0421 1338 SUPERFAMILY ARM repeat 40 1232 IPR016024 -
Mtr4g0421 1338 PANTHER SYMPLEKIN/PTA1-RELATED 1 1241 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 626 657 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 1303 1322 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 626 664 - -
Mtr4g0421 1338 MobiDBLite consensus disorder prediction 357 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0421 Mtr-Chr4 5071816 5086753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0421 K06100 - gmx:100779360 2046.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0421 4 5071816 5086753 Mtr4g0421 4 5071816 5086753 ECH