Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0418 ATGATGGCTAGTGAAGGTTGGCCAGAGCCAGTGATTAGAGTCCAAGCCTTAGCTGAAAGTGGCATAAGCTCAATCCCTCAACATTTCATCAAACCAAAATCCCAAAGACCTACCAAAACAAACTCTTTCACTAGCCAAACTTTTCATCATGTTCATGATGAAAACAACAAGAATAACATCAATATTCCAGTCATTGATTTACAACACTTATACGGCGAGGACGAGAAGCTCCGCGAGGAGACGCTAAAGCGCGTCTCGGAGGCGTGTAGAGAATGGGGATTCTTCCAAGTTTTGAACCATGGAGTTAGTCATGACTTGATGAAACGTGCTAGGGAAGTTTGGCGTGAGTTTTTTGAACTACCACTTGAGGTGAAAGAGGAGTATGCTAATTCTCCTACCACTTATGAGGGATATGGAAGTCGTTTGGGAGTGAAAAAAGGTGCCATTTTGGATTGGAGTGACTACTTTTTTCTTCATTACATGCCTTGCTCACTTAGGGACCAAACCAAGTGGCCTTCCCTTCCAACTTCTTTAAGGAATGTGATCAACGAATATGGTGAAGAAGTTGTGAAGTTAGGAGGAAGAGTACTTGAATTATTGTCAATTAATCTTGGCCTTAATGATGATTTCCTTCTAAATGCATTTGGTGGTGAAAATGATCTTGGTGGTTGCTTAAGGGTGAATTTCTATCCAAAGTGTCCTCAACCTGATCTCACTCTTGGTCTCTCCTCTCACTCTGACCCTGGTGGTTTGACCATTCTTCTTCCTGATGATTATGTATCTGGACTTCAAGTACGTAGAGGAGAAGATTGGATCACAGTTAAGCCTGTCCCAAATGCTTTCATCATCAATATTGGTGACCAAATTCAGGTGTTAAGCAATGCAATATACAAAAGCATAGAACACAGAGTAATTGTGAACTCCAACAAAGATAGAGTTTCATTGGCCTTCTTTTATAATCCAAGAAGTGATTTACTAATTCAACCTGCTAAGGAACTTATCACTAAGGATAGGCCAGCACTCTACCCACCAATGACATTTGATGAATATAGACTTTACATTAGGACAAAAGGGCCTTGTGGAAAAGCTCAAGTAGAATCTTTGGTTTCTCAAAAGTGA 1119 0.4057 MMASEGWPEPVIRVQALAESGISSIPQHFIKPKSQRPTKTNSFTSQTFHHVHDENNKNNINIPVIDLQHLYGEDEKLREETLKRVSEACREWGFFQVLNHGVSHDLMKRAREVWREFFELPLEVKEEYANSPTTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRDQTKWPSLPTSLRNVINEYGEEVVKLGGRVLELLSINLGLNDDFLLNAFGGENDLGGCLRVNFYPKCPQPDLTLGLSSHSDPGGLTILLPDDYVSGLQVRRGEDWITVKPVPNAFIINIGDQIQVLSNAIYKSIEHRVIVNSNKDRVSLAFFYNPRSDLLIQPAKELITKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLVSQK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0418 372 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 4 366 - -
Mtr4g0418 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 172 IPR026992 -
Mtr4g0418 372 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 4 366 - -
Mtr4g0418 372 Gene3D - 9 356 IPR027443 -
Mtr4g0418 372 Pfam 2OG-Fe(II) oxygenase superfamily 224 321 IPR044861 -
Mtr4g0418 372 PRINTS Isopenicillin N synthase signature 85 102 - -
Mtr4g0418 372 PRINTS Isopenicillin N synthase signature 281 307 - -
Mtr4g0418 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 220 321 IPR005123 -
Mtr4g0418 372 SUPERFAMILY Clavaminate synthase-like 10 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0418 Mtr-Chr4 5043136 5049082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0418 14 368 Glycosyltransferase AT5G59530 32.320 2.03e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0418 - - gmx:100809662 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0418 4 5043136 5049082 Mtr4g0418 4 5043136 5049082 ECH