Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0375 ATGCAGCATAATATATTTGCTACAATGCGTAGTTTAAAGATCATGGATGGTTGCAAAGGTGGTTCTCAGGTTTATCACCACCGTTCTTCCGGTGGAGGAAGCGGTGGAATAGGTGAAAAGCTTCTTCAACAGCTTCATGATCATATTAAAAGTCAAACATTTAGAACCAAATCTGTTCATAATTTTCATAATTTCCCAACACCGAATCAGACACCGTCTGAGGTTGTTGCTGAAGGATCTCTTTTGCCTTATGGGCTGCCCATGACAGAGCTTTTAGAGCCGAAGATTGAGCCGGTTTTGAGACCGGTTGATTTTGTAGAAAGGTTGGCTGGATTGCATAATAAGATTGAGAATTGTTTGGATGTTGAGAGGTCTGAGGTTTATTTGGAGCATTGTTCGATTTTTAAGGGATTGTCTGATGTGAAATTGTTTCGCAGGAGTCTAAGGTCAGCACGACAACATGCTGTGGATGTCCACAGCAAAATCGTGCTGGCCTCATGGCTCAGGTATGATAGGAGGGAGGATGAGCTGATTGGCTCGTCCTCGATGGATTGTTGTGGAAGGAATATTGAATGTCCTAAGGCTACTTTGGTTGCTAATGGGTATGATCCAGAATTGGTTTATGATCCTTGTAGTTGTCTACGTGATTGTGATGAGGAGGAGGAGGATTTTATGATGTTTGATGATCAACAATGCTCTACCCCGGATGAGGATGATGGAGGGTGGGATATATCGTTTTGTATCGGTGATGATGAAATTAGGTGTGGTAGGTTCAATATGGCTTCGCTTTCGAGGCCGTTTAAGACAATGTTGTATGGTGGATTCATAGAATCACGGAGAGGGACAATAAATTTTTCAAGGAATGGGTTTTCTGTAGAGGCAATGAAGGCTGCCGAGGTTTTTAGTAGGACTAAAAGTTTGACCACGATTGAGCCTAATGTGGTTTTGGAGTTGTTGTCTTTGGCGAACCGGTTTTGTTGCGAGGAGATGAAATGTGCTTGCGACACATATTTGGCGTCGCTGGTTTCTGACATGGAAGATGCCTTGTTGCTCATTGAGTATGGACTTGAGGAGACTGCGTATCTTTTGGTTGCGGCTTGCTTGCAGGTGGTTTTGAGGGAGCTACCTGCTTCGTTGCAGTGTTCGGGTTTTGCGAAATTGTTTTGTAGTCCAGAGGGTAGGGATAGGCTTGCTGCGGCAGGGCATGCGTCGTTTGTTCTGTATTATTTCTTGAGTCAAGTTGCAATGGAGGAAGAGATGAGGTCGAACATAACCGTGATGCTCGTGGAGAGATTAGTAGAGTGCGCAAAAGACGGATGGGAGAAACAACTTGCATTTCACCAATTTGGTGTTGTTATGTTTGAGAGAAAAGAATACAAAGATGCACAACATTGGTTTGAGGTAGCCGTGGAGGCAGGGCATGTTTATTCGTTAGTCGGAGTTGCAAGGGCCAAATATAGACGCGGTCATACATATGCGGCATATAAGATTATGAACTCGCTAATTAATGACCATAAACCTGTTGGATGGATGTATCAGGAAAGATCTTTGTATTGTTTTGGGAAGGAGAAAATGATGGACTTAATCTCTGCGACCGAATTAGATCCAACGCTTTCGTTTCCTTACAAATACCGAGCTGTTTCTTTGCTGGAGGAGAGCAGAATTGGACCTGCCATTGCAGAAATAAACAAATTAATCGGTTTCAAACTTTCTCCTGACTGTCTGGAATTGAGGGCTTGGTTCTTGATTGCCATGGAGGAGTACGAAGGAGCACTAAGAGATGTTCGGGCAATTTTGACATTGGATCCAAATTATATGATGTTCTATGGAAATATGCATGGTAATCACTTGGTAGAACTACTCAGTCCTGTTGTTCAGCAGTGCAATCTGGCTGATTGCTGGATGCAGTTGTACGACCGATGGTCCTCTGTCGATGACATTGGTTCGTTGGCTGTTGTACACCAGATGTTAGAAAATGATCCAGGGAAAAGTCTCTTGCGTTTTCGGCAATCTCTCCTTTTGTTACGGCTAAATTGTCAAAAAGCAGCCATGCGTAGTTTGCGTCTGGCTAGAAATCATTCTACTTCTGACCATGAAAGGCTTGTATATGAAGGATGGATACTGTATGACACCGGTCATCGTGAAGCAGCATTAGAAAAGGCGGAGGAGTCAATTTCTATTCAAAGATCATTTGAAGCTTACTTTCTCAAAGCTTATGCATTAGCTGACACAAATCTCGATTCTGAGTCTTCAGAGTATGTTATCCATCTCTTGGAGGAAGCTCTTAGATGTCCTTCAGATGGTCTTCGTAAAGGGCAAGCACTAAATAATCTTGGGAGTGTGTATGTAGATTGTGATAAGCTGGACCTTGCAGCTGACTGCTACATGAATGCACTCAACATCAAGCATACACGAGCCCATCAGGGGTTGGCGCGTGTATATCATCTTAAAAGACAGAGCAAAGATGCATATGATGAGATGACAAAGCTAATAGAAAAGGCTTGGAACAATGCATCGGCTTATGAGAAACGGTCGGAGTATTGTGGTCGTGACATGGCAAAGAGTGATCTTAGTATGTCAACACATTTGGATCCTCTAAGGACTTATCCTTACAGATATAGGGCAGCAGTTTTAATGGATGATCATAAAGAAGCTGAAGCAATCGAAGAGCTTTCAAGAGCCATTGAATTTAAGCCAGATCTTCAACTCTTAAATCTTAGAGCAGCCTTTTACCATTCAATAAATGATTTCGCTTCTTCCATCCGAGACTGCGAAGCAGCCCTTTGTCTTGATCCAGGCAACGCCGAGACGCTGGAGACTTATAACAAAGCACAGGAGGATATTAAGAAACAAAAGTGA 2859 0.4292 MQHNIFATMRSLKIMDGCKGGSQVYHHRSSGGGSGGIGEKLLQQLHDHIKSQTFRTKSVHNFHNFPTPNQTPSEVVAEGSLLPYGLPMTELLEPKIEPVLRPVDFVERLAGLHNKIENCLDVERSEVYLEHCSIFKGLSDVKLFRRSLRSARQHAVDVHSKIVLASWLRYDRREDELIGSSSMDCCGRNIECPKATLVANGYDPELVYDPCSCLRDCDEEEEDFMMFDDQQCSTPDEDDGGWDISFCIGDDEIRCGRFNMASLSRPFKTMLYGGFIESRRGTINFSRNGFSVEAMKAAEVFSRTKSLTTIEPNVVLELLSLANRFCCEEMKCACDTYLASLVSDMEDALLLIEYGLEETAYLLVAACLQVVLRELPASLQCSGFAKLFCSPEGRDRLAAAGHASFVLYYFLSQVAMEEEMRSNITVMLVERLVECAKDGWEKQLAFHQFGVVMFERKEYKDAQHWFEVAVEAGHVYSLVGVARAKYRRGHTYAAYKIMNSLINDHKPVGWMYQERSLYCFGKEKMMDLISATELDPTLSFPYKYRAVSLLEESRIGPAIAEINKLIGFKLSPDCLELRAWFLIAMEEYEGALRDVRAILTLDPNYMMFYGNMHGNHLVELLSPVVQQCNLADCWMQLYDRWSSVDDIGSLAVVHQMLENDPGKSLLRFRQSLLLLRLNCQKAAMRSLRLARNHSTSDHERLVYEGWILYDTGHREAALEKAEESISIQRSFEAYFLKAYALADTNLDSESSEYVIHLLEEALRCPSDGLRKGQALNNLGSVYVDCDKLDLAADCYMNALNIKHTRAHQGLARVYHLKRQSKDAYDEMTKLIEKAWNNASAYEKRSEYCGRDMAKSDLSMSTHLDPLRTYPYRYRAAVLMDDHKEAEAIEELSRAIEFKPDLQLLNLRAAFYHSINDFASSIRDCEAALCLDPGNAETLETYNKAQEDIKKQK* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0375 952 SUPERFAMILY TPR-like 758 941 IPR011990 GO:0005515
Mtr4g0375 952 ProSiteProfiles TPR repeat profile. 772 805 IPR019734 GO:0005515
Mtr4g0375 952 Coils Coil 934 952 - -
Mtr4g0375 952 SUPERFAMILY TPR-like 573 753 IPR011990 GO:0005515
Mtr4g0375 952 Gene3D Tetratricopeptide repeat domain 615 850 IPR011990 GO:0005515
Mtr4g0375 952 SUPERFAMILY TPR-like 445 609 IPR011990 GO:0005515
Mtr4g0375 952 Gene3D Tetratricopeptide repeat domain 428 612 IPR011990 GO:0005515
Mtr4g0375 952 Gene3D Tetratricopeptide repeat domain 851 952 IPR011990 GO:0005515
Mtr4g0375 952 SUPERFAMILY POZ domain 239 339 IPR011333 -
Mtr4g0375 952 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 951 - -
Mtr4g0375 952 SMART tpr_5 572 605 IPR019734 GO:0005515
Mtr4g0375 952 SMART tpr_5 902 934 IPR019734 GO:0005515
Mtr4g0375 952 SMART tpr_5 772 805 IPR019734 GO:0005515
Mtr4g0375 952 SMART tpr_5 868 901 IPR019734 GO:0005515
Mtr4g0375 952 SMART tpr_5 698 731 IPR019734 GO:0005515
Mtr4g0375 952 PANTHER ETO1-RELATED 1 951 IPR044631 GO:0010105
Mtr4g0375 952 Gene3D Potassium Channel Kv1.1; Chain A 237 381 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0375 Mtr-Chr4 4441229 4447423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0375 - - gmx:100799641 1492.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0375 4 4441229 4447423 Mtr4g0375 4 4441229 4447423 ECH
Mtr7g1691 7 32472742 32478970 Mtr4g0375 4 4441229 4447423 PCT