Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0346 ATGTCAAACAATACTCCTCCTCATTCAAAGTATGATGTTTTTGTAAGCTTTAGTGGCAAGGAAATCCGTAGCGGCTTTCTTAGCCATTTGGTTAAGGCTTTTTGTCAAAAGCAAATAAATGCTTTTGTTGATGACAAACTTAAGAGGGGAGATGACATATCAGATTCACTTGGTGAAGCAATCGAAGGATCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTGTTCACATTGGTGTTTAAAAGAACTTGTGAAAATAGTTGAGTGTAAAGAGAAATATGCACAAATTGTAATACCTGTTTTCTTCAGGGTAGATCCTACAGATATACGACATCAAAAAAGGAGTTATGAAAATGCATTTGCTGAACATGAAAAAAAGTATAGCTCATATGAGGTGCAGATGTGGAAACATGCTTTGAAAATATCTGCTAATTTGTCAGGAATTACATCATCAAGTTTTCAGTAA 471 0.3397 MSNNTPPHSKYDVFVSFSGKEIRSGFLSHLVKAFCQKQINAFVDDKLKRGDDISDSLGEAIEGSFISLIIFSENYACSHWCLKELVKIVECKEKYAQIVIPVFFRVDPTDIRHQKRSYENAFAEHEKKYSSYEVQMWKHALKISANLSGITSSSFQ* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0346 156 Pfam TIR domain 10 143 IPR000157 GO:0007165
Mtr4g0346 156 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 149 IPR035897 -
Mtr4g0346 156 SMART till_3 10 147 IPR000157 GO:0007165
Mtr4g0346 156 Gene3D - 7 156 IPR035897 -
Mtr4g0346 156 PANTHER TMV RESISTANCE PROTEIN N-LIKE 8 152 - -
Mtr4g0346 156 PANTHER TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN 8 152 - -
Mtr4g0346 156 Coils Coil 115 135 - -
Mtr4g0346 156 ProSiteProfiles TIR domain profile. 9 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0346 Mtr-Chr4 4178985 4179455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0346 6 155 Miscellaneous Gene Families AT5G44900 37.013 3.94e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0346 - - mtr:MTR_4g014120 318.931