Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0318 ATGGACCAATCTCTCTCTCAACAAAACCCACACCTTCCCACGTTAACCAACCAACCGTACCCCATACTTCAAAAACACAAAACCAACAACCATAACACAGTCAAAAAAACACAAACAAAGTACAACACAAAATCTTCAACCATGAAGAAACAGAAACAGAAGCTTTCACAACAAAACCCATTTGAAACACTCTCAGAAGAACTCATATTCACAATCCTCGACTTCCTCGAACCAAAAAACAACAACCAAACCTTAAAATCATTCTCCTTAACTTGCAAATATTTTCACGCGCTTGAATCAAAACACAGACGCGCTTTGCGCCCTTTACGCGCCGAACATATACAACCACTTCTCAAACGTTACACCAACGTAGAAAATCTCGATCTCACCTTATGTCCGCGCGTGAATGACACGTCCCTTAATTTAATCGCTGGAGCGTATAATTCTACGCTCCAGCGATTGAATTTATCGCGTTCAAGGTTTTTTACGGGGAATGGTGTGTTGAATGTTGCTGTTAGGTGTGTTAATTTGGTTGAGCTTGATTTGTCGAACGCGACGGAGTTAAGGGATGCAGCTATGGTTGGTGTTGCACGCGCTGTTAATTTGGAGAGGCTTTGGTTGAATAGGTGTAAGTTGGTTACAGATATGGGGATTGGTTGTATTGCTGTTGGATGTAAGAAGTTGAAGTTGATTAGTTTGAAGTGGTGTGTTGGTATTGCTGATTTAGGTGTTGATTTACTTGCCATCAAATGTAAAGAACTTTGTACTTTGGATCTCTCTTATTTGCCGATCACAGAGAAATGTCTCTCCTCGATCTTCAAATTGCAACATCTCGAAGATTTAGTCCTTGAAGGATGCTTTGGCATTGGCGATGACAGCCTCAATAACGAAGTCTTCAAACAAGGGTGCAAGACATTAAAGAAACTTGACATCTCAGGTTGTCAAAATATAAGTCATATTGGCCTGTCAAAGCTAACAAGCATTTCTGGAAGTGTCGAACAACTTATATTAGCAGATGGTTCTCCGGTGACTCTTGCTCTTGTTGATAGTTTAAATAAACTTTCAATGCTGCAATCAATCATTTTAGACGGCTGCAATATCACCTCTGACGGATTAAAAGCCATTGGAAATTTATGCATTTCACTCAGAGAACTGAGCTTAAGCAAATGTTCAGGAGTGACAGATGACGCTCTCTCTTTCGTTGTTTCAAAACACAAAGATTTAAGGAAGCTCGACATCACATGCTGCCGCAAGATAACTGATGTTTCGATTGCGAGCATTGCAAATGCATGCAGAAGTCTCACTTCTCTCAAGATGGAGTCGTGTACGCTAGTTTCATCGGAAGCGTATATATTGATTGGACAGAAATGCCATTATCTTGAAGAGCTTGATCTCACAGATAATGAAATTGATGATGAAGGCCTTGAGTCAATATCTCGTTGCTCGAGGCTCTCCAGCCTGAAACTAGGAATCTGCCTGAACATAACTGATAAAGGAGTGGCCAATGTTGGCATGTGTTGCTCAAAGTTAAAGGAACTGGATCTTTACAGATGCACAGGGGTAACAGATTTGGGAATCTCAGCAATTGCTTCTGGTTGCCCTAGCCTTCAGATGATAAATGCTGCTTATTGCACTAGCATTACTGATAGGGCATTATTCAGCTTGTCAAAATGTGTAAATTTGCAGACACTTGAAATTCGAGGATGTTTTCTTGTTACATCGTTTGGTTTGACATGTATTGCAATGAATTGCAAACAACTAAGCCGCTTAGACCTAAAAAAGTGTTATAACATCGATGATAGTGGTATGGTTCCACTAGCCCATTTCTCGCAAAATCTAAGACAGATAAACTTGTCCTATACCTCAGTTACCGATGTAGGGCTTCTGTCACTTGCCGGTATCAGTTGCCTTCAAAATTTCACCCTGCTTCACCTGCAGGGCGTGGCTCCACAAGGACTTGCAGCGGCCTTATTAGCATGCGGAGGGCTAACAAAAGCAAAGCTTCATGTTAAACTAAGATCTCTATTACCCAAGCTTCTCATCAAACATGTAGAAGCACGTGGATGTGTGTTTGAATGGAGAGATAAAGAGTTTCAGGCTGAATTGGACCCAAGGTGTTGGAAATTACAGTTAGAAGATCTGATGCATTAG 2151 0.41 MDQSLSQQNPHLPTLTNQPYPILQKHKTNNHNTVKKTQTKYNTKSSTMKKQKQKLSQQNPFETLSEELIFTILDFLEPKNNNQTLKSFSLTCKYFHALESKHRRALRPLRAEHIQPLLKRYTNVENLDLTLCPRVNDTSLNLIAGAYNSTLQRLNLSRSRFFTGNGVLNVAVRCVNLVELDLSNATELRDAAMVGVARAVNLERLWLNRCKLVTDMGIGCIAVGCKKLKLISLKWCVGIADLGVDLLAIKCKELCTLDLSYLPITEKCLSSIFKLQHLEDLVLEGCFGIGDDSLNNEVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGSVEQLILADGSPVTLALVDSLNKLSMLQSIILDGCNITSDGLKAIGNLCISLRELSLSKCSGVTDDALSFVVSKHKDLRKLDITCCRKITDVSIASIANACRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDLTDNEIDDEGLESISRCSRLSSLKLGICLNITDKGVANVGMCCSKLKELDLYRCTGVTDLGISAIASGCPSLQMINAAYCTSITDRALFSLSKCVNLQTLEIRGCFLVTSFGLTCIAMNCKQLSRLDLKKCYNIDDSGMVPLAHFSQNLRQINLSYTSVTDVGLLSLAGISCLQNFTLLHLQGVAPQGLAAALLACGGLTKAKLHVKLRSLLPKLLIKHVEARGCVFEWRDKEFQAELDPRCWKLQLEDLMH* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0318 716 SUPERFAMILY RNI-like 301 551 - -
Mtr4g0318 716 SUPERFAMILY RNI-like 507 644 - -
Mtr4g0318 716 SMART LRR_CC_2 533 558 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 201 224 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 610 634 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 507 532 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 225 250 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 405 430 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 174 199 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 482 506 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 275 300 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 457 481 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 379 404 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 148 173 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 431 456 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 354 378 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 121 146 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 560 583 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 303 328 IPR006553 -
Mtr4g0318 716 SMART LRR_CC_2 584 609 IPR006553 -
Mtr4g0318 716 Gene3D Ribonuclease Inhibitor 334 451 IPR032675 -
Mtr4g0318 716 SUPERFAMILY RNI-like 114 325 - -
Mtr4g0318 716 Gene3D Ribonuclease Inhibitor 55 333 IPR032675 -
Mtr4g0318 716 PANTHER UNCHARACTERIZED 48 652 - -
Mtr4g0318 716 Gene3D Ribonuclease Inhibitor 452 702 IPR032675 -
Mtr4g0318 716 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 48 652 - -
Mtr4g0318 716 Pfam Leucine Rich repeat 303 325 IPR001611 GO:0005515
Mtr4g0318 716 Pfam Leucine Rich repeat 355 375 IPR001611 GO:0005515
Mtr4g0318 716 Pfam Leucine Rich repeat 507 530 IPR001611 GO:0005515
Mtr4g0318 716 Pfam Leucine Rich repeat 456 479 IPR001611 GO:0005515
Mtr4g0318 716 Pfam Leucine Rich repeat 610 632 IPR001611 GO:0005515
Mtr4g0318 716 Pfam Leucine Rich repeat 407 428 IPR001611 GO:0005515
Mtr4g0318 716 SUPERFAMILY F-box domain 48 99 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0318 Mtr-Chr4 3858753 3863379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0318 K10268 - gmx:100803617 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0318 4 3858753 3863379 Mtr4g0318 4 3858753 3863379 ECH