Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0311 ATGCGAGGAAGACAACGAGTCGCATCAAGGGAATTATTAATTGTGCATGATAGTAAAGATGATAATCTAGTGCGTGTACAGAGTGCCAAACCTTGTTGGCGGCGCTCTTTGCGACATGTAATAGTGGCCTCGATTTCCTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGATCTCGGCTTTAGTGGGGATACATTGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTTCTTTCAGTGGGTGGATTGCAGATGGGGTTGGGCGTAGAAGAAGTTTCCAGCTGTGTGCTTTGCCTATGATCATTGGAGCAATAATGAGTGCAACATCAAAATCTCTCTGGGGCATGCTTTTGGGAAGGTTTTTTGTTGGTACTGGACTGGGACTTGGCCCGCCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTACGGGGTACTTATGGGGGCTTAACTCAGATTGCAACATGTCTTGGAATCATGGGTTCTCTCTTTATAGGAATCCCTTCAAAAGAAATAGTTGGTTGGTGGCGGATTTGTTTTTGGATATCTGTCATCCCTGCTGCTGCACTTGCTCTTTTCATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAAAGGAAGAACCGTTGAAGCTGAGGCTGAATTTGAGAAGCTCTTGGGAGGACTACATGTGAAACCTGCGATGAGTGAACTGACAAAGTCTGACAGAGGTGATGAGTCCGGCACAATGAAGCTCTCAGAAATATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCTGCGCTTTTTGCTTTGCAGCAACTGTCCGGCATAAATGCTGTGTTCTATTTCTCTTCAGCTACCTTTGAAAGCTTTGGTGTATCATCAAAGATTGGAAACACATGTGTAGGAATATGCAATTTATTGGGTTCAGTTATTTCAATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTTGGTAGCTTTTTAGGCATGGCAGTAACAATGGGTCTACAAGCCATTGCTGCAAGTTCTTATGCATCTGGGTTTGGAGCAATGTATCTATCCGTAGGTGGCATGTTGCTGTATGTGCTATCATTTGCTCTTGGTGCTGGTCCAGTTCCTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGAGCCAAGGCAATGGCAATATGCTTGGCTGTGCATTGGGTGATAAACTTCTTTGTGGGGCTATTATTTTTGCGCATGCTGGAACAAATGGGAGCACAACTCTTGTATAGTATTTTTGGTTCATTTTCTTTGTTAGCTGTGATTTTTGTGAAGAAATATGTTCTGGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACAAGAAATAGTCTAA 1437 0.4322 MRGRQRVASRELLIVHDSKDDNLVRVQSAKPCWRRSLRHVIVASISSFLYGYHIGVVNETLESISIDLGFSGDTLAEGLVVSICLGGAFIGSSFSGWIADGVGRRRSFQLCALPMIIGAIMSATSKSLWGMLLGRFFVGTGLGLGPPVAALYVAEVSPPAVRGTYGGLTQIATCLGIMGSLFIGIPSKEIVGWWRICFWISVIPAAALALFMEICAESPHWLFKKGRTVEAEAEFEKLLGGLHVKPAMSELTKSDRGDESGTMKLSEILFGCHARVMFIGSALFALQQLSGINAVFYFSSATFESFGVSSKIGNTCVGICNLLGSVISMILMDKLGRKVLLLGSFLGMAVTMGLQAIAASSYASGFGAMYLSVGGMLLYVLSFALGAGPVPCLLMSEILPGKIRAKAMAICLAVHWVINFFVGLLFLRMLEQMGAQLLYSIFGSFSLLAVIFVKKYVLETKGKSLQEIEIALLAQEIV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0311 478 CDD MFS_GLUT_like 42 459 - -
Mtr4g0311 478 PRINTS Sugar transporter signature 47 57 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 PRINTS Sugar transporter signature 287 297 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 Pfam Sugar (and other) transporter 40 470 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr4g0311 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 461 IPR020846 GO:0022857
Mtr4g0311 478 TIGRFAM SP: MFS transporter, sugar porter (SP) family 40 468 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g0311 478 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g0311 478 ProSitePatterns Sugar transport proteins signature 1. 328 344 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g0311 478 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 21 475 - -
Mtr4g0311 478 PANTHER - 21 475 IPR045263 -
Mtr4g0311 478 Gene3D MFS general substrate transporter like domains 33 473 IPR036259 -
Mtr4g0311 478 SUPERFAMILY MFS general substrate transporter 25 469 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0311 Mtr-Chr4 3780690 3788069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0311 5 417 Organic Solute Cotransporters AT1G67300 66.351 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0311 - - aprc:113857086 805.438