Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0307 ATGGTTAGAGCTATAGAACAAGAACAGGAAAATAACAAATCCAAACTATTCAATTCCAGAGGAATGTTTGAGAATTCAGGAAGACATACAAAAAGTTTAAGCATTGAAAGTGCTAGCACATTAGATCCTACTTCTGAAGATGATCCTGCTTCATCAAGAAGTCAAGGATCAAAACCTTTAAATGATTCTGAAAGGGTTCTTGCTGAGAAATCAAGAACAATCAAAGAGGAAATTTTAGCCAAAGAAGCCAAAGAGAAGATATCTCAAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTACTATTGGGGGAAGATATGTCTGGTGGAGGAAAAGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTAACAAATCTTGCTGCTGCTGTTTTCGGTGAACAAAAGCGCCTAGAGCCAATGCCACCGGAAAGGAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTTTCGGTCACCGATTACGTTGTTGAAATGGTTCCAACACAGCAGAAATCCAAGGATGGTTCAATCATGGAGATTATGACAACGCGACAACGGACTGATCTCCACATGAACATCCCTGCCTTGAGAAAGCTTGATGCAATGCTTATTGATTGTCTAGATAACTTCAAAGACCAAAGTGAATTCTACTATGTATCAAAAGATGCTGATGATCCAGATAGGTCAAATGGGAAAAATGATGACAAGTGGTGGTTACCTACACCTAAAGTACCTGCAGAAGGTTTATCTGAAGCAGCAAGAAGATTTTTGCAGTATCAGAAAGATTGTGTGAATCAAGTACTTAAAGCAGCAATGGCTATAAATGCTCAAACTCTATCAGAAATGGAGATTCCTGAAAGCTATATTGAATCCCTACCTAAGAATGGAAGAGCAAGTCTAGGAGACATAATCTACAGGAATATTACCGATGAATTTTTCGATCCCGATCAGTTCCTAGGGACAATAGACATGTCATCAGAACATAAAATTCTTGATCTCAAGAATAGAATTGAGGCATCAATAGTGATTTGGAGGAGGAAGATGAACCAAAAAGATTCCAAATCAGCATGGGGTTCTGCTGTGAGTTTGGAGAAAAGAGAGCTCTTTGAAGAGAGAGCAGAAACCATCTTACTTCTCTTGAAACATCGGTTTCCTGGACTTCCACAATCTTCATTGGATATAAGCAAAATCCAATTCAACGGGGATGTAGGGCAAGCTGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTAGCCTTTACAGTTCTATCAAGAGTAGAAGATGTACTCCATGCAGATAACCAAACACAAAATCCAACTCAAGGAAGAAGAAGCAGTGTTAGAAATCCAGTTCCAAAGCCAGACAAGTGTCCAACTCCAAGAGATGTAGACAGAAGTGACGCGGAAACACCTTGTTCGATGACACTATCGGATTTCATGGGTTGGAGCAATGATCAGGCTGAATCGTTCATTAGAAGGGATCCTTTCGCTGTTTCAGATGATTTGGACAAAGATATTGATACTGAAAAGCTTCCAAAACTTCAACCCATAGTGACTGATAAGAAAGCGTCCTACCTTGAAAATATAGGAGGTTTGAGAAGTCCAACATCACGCCATTGA 1623 0.3925 MVRAIEQEQENNKSKLFNSRGMFENSGRHTKSLSIESASTLDPTSEDDPASSRSQGSKPLNDSERVLAEKSRTIKEEILAKEAKEKISQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNALTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYVVEMVPTQQKSKDGSIMEIMTTRQRTDLHMNIPALRKLDAMLIDCLDNFKDQSEFYYVSKDADDPDRSNGKNDDKWWLPTPKVPAEGLSEAARRFLQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDIIYRNITDEFFDPDQFLGTIDMSSEHKILDLKNRIEASIVIWRRKMNQKDSKSAWGSAVSLEKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNGDVGQAVLESYSRILESLAFTVLSRVEDVLHADNQTQNPTQGRRSSVRNPVPKPDKCPTPRDVDRSDAETPCSMTLSDFMGWSNDQAESFIRRDPFAVSDDLDKDIDTEKLPKLQPIVTDKKASYLENIGGLRSPTSRH* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0307 540 Coils Coil 77 97 - -
Mtr4g0307 540 MobiDBLite consensus disorder prediction 11 61 - -
Mtr4g0307 540 MobiDBLite consensus disorder prediction 1 68 - -
Mtr4g0307 540 Gene3D PRONE domain, subdomain 1 95 435 - -
Mtr4g0307 540 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 89 540 IPR038937 GO:0005085
Mtr4g0307 540 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 438 IPR005512 GO:0005085
Mtr4g0307 540 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 89 540 - -
Mtr4g0307 540 MobiDBLite consensus disorder prediction 433 448 - -
Mtr4g0307 540 Gene3D PRONE domain, subdomain 2 284 400 - -
Mtr4g0307 540 MobiDBLite consensus disorder prediction 433 471 - -
Mtr4g0307 540 ProSiteProfiles PRONE domain profile. 81 444 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0307 Mtr-Chr4 3742774 3746503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0307 - - gmx:100812078 823.157