Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0303 ATGGGATCCATTGGCGTTCTCCTTGTATCTCATCAAGTAATCCCATACTTAGAACAAGAACTCAACAAACGCTACAACCTCTTCCGCTTATGGGATTTCCCACAAAAATCTCAACTTTTAACTCAACACGGCGCGTCGATCCGTGCGGTGGTCGGAGATGCATTCGCCGGTGCCGATTCTGACCTCATTGAAGCACTTCCGAAGCTTGAAATCGTTTCGAGCTTCAGTGTTGGTGTTGATAAGATTGATCTTGGCAAGTGTAAGGAGAAAGGGATTCGCGTGACGAATACACCTGATGTTTTGACTGATGAAGTTGCTGATTTGGCTATTGGTTTGATGCTTACGCTTCTTAGAAGGATTTGTGAATGTGATCGTTATGTTAGAGGTGGAAATTGGAAGCATGGTGATTATAAATTGACCACAAAGTTCTCTGGGAAAACTGTCGGCATTATTGGGCTGGGAAGGATTGGCGCAGCCATTGCCAAGAGAGCTGAAGGCTTTAACTGTCCAATATCCTACTATTCGAGAACTCAAAAGCAGGAGTCAAAATACAAGTACTATCCAAGTGTTGTTGAGCTTGCATCCAACTGTGATATACTAGTTGTTGCCTGCCCCCTTACAGAGGAAACCCATCACATCATCAACCGGGAGGTCATTAACGCACTCGGTCCAAAGGGTTTCCTAATTAACATCGGTCGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCACTGCTTGAAGGTCGTTTGGGTGGAGCTGGACTTGATGTGTTTGAAAACGAGCCTCATGTTCCTGAGGAGCTATTTGGGCTTGAAAATGTTGTACTGTTGCCTCATGTTGGAAGCGCCACGGTTGAAACTCGAACTGCCATGGCTGACCTTGTGCTTGGAAACCTAGAGGCTCATTTCCTTGGAAAGCCACTGTTAACTCCCTTGATCAGCATCGTCTTCGTGTGCTTATTCCACCAGTTAACGCACCAAATCCAACCATATGCAACTCCATTTTTCAAAACACTAACCCTAATGGAATCCATAGATGTTCTCCTCGTAGCTCAAGTACTCCCTTACTTAGAACAAGAACTCAGCAAACGCTACAACCTTTTCCGCATATGTGATTACCCGCAAAAATCTCAATTCTTAACTCAACATGGCGCGTTGATCCGTGCGGTGGTGGGAAACGGATCCTGCGGCGCCGATTCTGAGCTCATTGATGCACTGCCAAATCTAGAGATTGTTTCGAGCTTCAGCGTTGGTGTTGACAAGATTGATCTTAACAAGTGTAAGGAGAAAGGGATTTGTGTGACGAATACACCTGATGTGTTGACTGATGATGTTGCTGATTTAGCTATTGGTTTGATGCTTACACTTCTTAGGAGGATTTGTGAATGTGATCGATTTGTTAGAAGTGGAGACTGGAAGCATGGTGACTATAAGTTGACCACTAAGTTCTCTGGTAAAACGGTTGGCATTATTGGGCTGGGAAGGATTGGCACAGCAATTGCGAAGAGAGCTGAAGGTTTTAATTGTTCAATATGTTACTATTCTAGAACTCAAAAGCAGGAACCAAAATACAAGTACTATCCAAATGTTGTTGAGTTAGCATCCAACTGCGACATACTAGTCGTTGCCTGCTCTCTTACAGATGAAACCCATCACATCATCAACCGGGAGGTCATCAATGCACTTGGTCCGAAGGGTTTCCTAATTAACATCGGTCGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCACTGCTTGAAGGTCGTTTGGGTGGAGCTGGACTTGATGTGTTTGAAAACGAGCCTCATGTTCCCGAAGAGCTATTTGGGCTAGAAAATGTTGTGTTGCTGCCTCATGTTGGAAGTGGCACGGTAGAAACTAGAACTGCCATGGCCGACCTTGTTCTTGGAAACTTGGAGGCTCATTTCCTTGGAAAGCCACTGTTAACTCCCTTGGTTTAA 1968 0.4502 MGSIGVLLVSHQVIPYLEQELNKRYNLFRLWDFPQKSQLLTQHGASIRAVVGDAFAGADSDLIEALPKLEIVSSFSVGVDKIDLGKCKEKGIRVTNTPDVLTDEVADLAIGLMLTLLRRICECDRYVRGGNWKHGDYKLTTKFSGKTVGIIGLGRIGAAIAKRAEGFNCPISYYSRTQKQESKYKYYPSVVELASNCDILVVACPLTEETHHIINREVINALGPKGFLINIGRGKHVDEPELVSALLEGRLGGAGLDVFENEPHVPEELFGLENVVLLPHVGSATVETRTAMADLVLGNLEAHFLGKPLLTPLISIVFVCLFHQLTHQIQPYATPFFKTLTLMESIDVLLVAQVLPYLEQELSKRYNLFRICDYPQKSQFLTQHGALIRAVVGNGSCGADSELIDALPNLEIVSSFSVGVDKIDLNKCKEKGICVTNTPDVLTDDVADLAIGLMLTLLRRICECDRFVRSGDWKHGDYKLTTKFSGKTVGIIGLGRIGTAIAKRAEGFNCSICYYSRTQKQEPKYKYYPNVVELASNCDILVVACSLTDETHHIINREVINALGPKGFLINIGRGKHVDEPELVSALLEGRLGGAGLDVFENEPHVPEELFGLENVVLLPHVGSGTVETRTAMADLVLGNLEAHFLGKPLLTPLV* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0303 655 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 353 652 IPR006139 GO:0016616|GO:0051287
Mtr4g0303 655 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 310 IPR006139 GO:0016616|GO:0051287
Mtr4g0303 655 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 343 655 - -
Mtr4g0303 655 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 1 314 - -
Mtr4g0303 655 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 283 IPR036291 -
Mtr4g0303 655 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 282 IPR006140 GO:0051287
Mtr4g0303 655 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 451 623 IPR006140 GO:0051287
Mtr4g0303 655 CDD HPPR 7 304 - -
Mtr4g0303 655 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 343 655 - -
Mtr4g0303 655 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 314 - -
Mtr4g0303 655 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 IPR029752 -
Mtr4g0303 655 Gene3D - 443 626 - -
Mtr4g0303 655 Gene3D - 102 285 - -
Mtr4g0303 655 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 489 516 IPR029752 -
Mtr4g0303 655 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 347 476 - -
Mtr4g0303 655 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 7 135 - -
Mtr4g0303 655 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 443 624 IPR036291 -
Mtr4g0303 655 CDD HPPR 346 645 - -
Mtr4g0303 655 Gene3D - 359 649 - -
Mtr4g0303 655 Gene3D - 18 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0303 Mtr-Chr4 3714668 3720950 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0303 - K15919 qlo:115990161 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0303 4 3714668 3720950 Mtr4g0303 4 3714668 3720950 ECH