Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0286 ATGATACAAATGTTTCGATGGTTATTGAAGCCTAAGTTCTATTCAAAATGTATATCATACATAAAGTGTATTAAGACGCGGTTAGAGACGATGGAGAAGAAGAGAAGAGCTATTCAGAAGTTTACGAAGAATGACATTGCTGAGCTTCTTAGGAGTGGACATGATTATGATGCATATAAAAGGACTGAAGGGCTTCTGTTTGAGGAAAAAATATTATCCTGCTATGAATTCATTGAAAAGTTTATTGGATGCATATCAGATCATCTTGAAGAATTAATTAAGCAGAGTGAATGCCCTGAGGAATGCAAGGAAGCTATACCATCATTGATGTATGCTGCAGCAAGAATTTCTGACCTACCAGAATTGCGTGACCTTAGAACTTTGTTTACAGAAAAATATGGAAATTCTCTTGAACCATACATAAATAAAGAGTTTGTTGAGAAGTTGAGACATTCTCCAACAAGAGAAATGAAGATAAGGTTATTATATGATATTGCACAAGAGTTCTCTATAGAATGGGATGGTAAGGCTTTGAAGAAAATGCTTTATACACACCCATCATTATATGAATTGGGTGGAAGTGGAGGAGGAGAACACAAAAATGAAAGTGACTTGAACACATTCAAAGAAAATGAGACAATGCACCAATACAATAGTAGTGATGATGAAACAACAAGCACAGACACATCACCATCTCATCATCATGGAAGAAAAGCTAGTTCAAGTTCATTTGGAAGCATATCTGAAAATGAAGAAGAAGTTGAAGAAATCAAGAAACCAAATTCCTTTTTGCTAATTCCACCCCCTTACTTCAAACCACAAAAAACTAATAACAAAGGTGAAATAAATTCCAACAAAACATCAGACTCTGAACCATTAGAGAAAAATATTGATTCAAGTGGATTGAAACCAACAACATCAGTGGAAACATCATCTTCAAAAGGGTATGCACAAATGTGGGGTGGTGCATGGCATGTGCCTTCTACTTTACCTGATTATGATGATTTTATTGCTCGTCTTAAAGCTTTCACTGGAAGATCATAG 1044 0.3525 MIQMFRWLLKPKFYSKCISYIKCIKTRLETMEKKRRAIQKFTKNDIAELLRSGHDYDAYKRTEGLLFEEKILSCYEFIEKFIGCISDHLEELIKQSECPEECKEAIPSLMYAAARISDLPELRDLRTLFTEKYGNSLEPYINKEFVEKLRHSPTREMKIRLLYDIAQEFSIEWDGKALKKMLYTHPSLYELGGSGGGEHKNESDLNTFKENETMHQYNSSDDETTSTDTSPSHHHGRKASSSSFGSISENEEEVEEIKKPNSFLLIPPPYFKPQKTNNKGEINSNKTSDSEPLEKNIDSSGLKPTTSVETSSSKGYAQMWGGAWHVPSTLPDYDDFIARLKAFTGRS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0286 347 Gene3D - 9 179 IPR042277 -
Mtr4g0286 347 MobiDBLite consensus disorder prediction 276 290 - -
Mtr4g0286 347 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 12 345 - -
Mtr4g0286 347 MobiDBLite consensus disorder prediction 299 314 - -
Mtr4g0286 347 Pfam Regulator of Vps4 activity in the MVB pathway 21 171 IPR005061 GO:0015031
Mtr4g0286 347 PANTHER IST1 FAMILY MEMBER 12 345 IPR005061 GO:0015031
Mtr4g0286 347 MobiDBLite consensus disorder prediction 215 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0286 Mtr-Chr4 3489373 3491837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0286 - - gmx:102665874 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0286 4 3489373 3491837 Mtr4g0286 4 3489373 3491837 ECH