Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0275 ATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAATTGTTTGTCTACAATGTATGTACTATATCACACTTGGATTGCTCTTAACAGTTCTTGTTGGCACTCGCGTTTCTCGGTTGAGCCTTGTGTATTTCTTTGACTATGTTACTGTTACTACCTCTACCGTTACTGGATGGTGCGTTTGTGCTTCATTTCTGCTCAGCTCAGCTGCAGGGGCTGTGTATATGCTTTATTTGATTGAAAGATCAAAGAAGTGCTTGGATTTTGCAGCCACTATCTATATCATTCATCTTTGCATATGCATAGTGTATGGGGGTTGGCCGTCTTCTATAGCATGGTGGATTGTGAATGGTACTGGAATTGCCTTGATGGCTTTGCTAGGTGAATATCTGTGTATCAGACGCGAACTCCGGGAGATACCAATACCACGATATCGTTCAAATGTTTGA 459 0.4227 MFYGAVVWDPWLIVAQIVCLQCMYYITLGLLLTVLVGTRVSRLSLVYFFDYVTVTTSTVTGWCVCASFLLSSAAGAVYMLYLIERSKKCLDFAATIYIIHLCICIVYGGWPSSIAWWIVNGTGIALMALLGEYLCIRRELREIPIPRYRSNV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0275 152 PIRSF SYS1_homolog 1 152 IPR016973 GO:0000139
Mtr4g0275 152 PANTHER PROTEIN SYS1 HOMOLOG 1 152 - -
Mtr4g0275 152 PANTHER SYS1 1 152 IPR019185 -
Mtr4g0275 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 144 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0275 Mtr-Chr4 3329035 3333223 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0275 K20318 - tcc:18595890 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0275 4 3329035 3333223 Mtr4g0275 4 3329035 3333223 ECH